Gene detail information of Glyur000101s00010294 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G10695.1 | 1.00E-13 | |
| NR | XP_003603540.1 | 3.01E-21 | hypothetical protein MTR_3g108890 [Medicago truncatula] |
| trEMBL | tr|G7JCD8|G7JCD8_MEDTR | 1.00E-21 | Uncharacterized protein {ECO:0000313|EMBL:AES73791.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00101 | 47478 | 48147 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.733 |
| SRR1783600 | control | 10.875 |
| SRR1783602 | moderate drought stress | 20.411 |
| SRR1811619 | moderate drought stress | 18.936 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 169.641 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 178.424 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.400 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.323 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 155.645 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 171.973 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 58.106 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 56.522 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.110 |
| SRR2868004 | Drought Stress (root) | 23.974 |
| SRR2967015 | Control (root) | 79.430 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 544.425 |
| SRR9715740 | Leaf | 583.734 |
| SRR9715741 | Leaf | 566.161 |
| SRR9715739 | Root | 287.340 |
| SRR9715742 | Root | 300.668 |
| SRR9715743 | Root | 304.283 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 62.590 |
| SRR8749028 | MeJA induced 9h | 20.389 |
| SRR8749029 | MeJA induced 9h | 63.097 |
| SRR8749030 | Uninduced | 6.824 |
| SRR8749031 | Uninduced | 18.832 |
| SRR8749032 | Uninduced | 21.684 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.138 |
| SRR8400027 | Control - Root | 43.791 |