Gene detail

Gene detail information of Glyur000101s00010287.1

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT2G24520.1	H(+)-ATPase 5
NR	XP_007137116.1	hypothetical protein PHAVU_009G100900g [Phaseolus vulgaris]
COG	YP_005270382.1	plasma-membrane proton-efflux P-type ATPase [Acetobacterium woodii DSM 1030]
Swissprot	tr\|Q9SJB3\|PMA5_ARATH	ATPase 5, plasma membrane-type
trEMBL	tr\|V7AUY2\|V7AUY2_PHAVU	Uncharacterized protein {ECO:0000313\|EMBL:ESW09110.1}

Sequence

Transcript Sequence

>Glyur000101s00010287.1
ATTATTTGTTCAACTCATTAGGGAGTTGAATTTCTTTTCCCTTGTTGGAGAACTCGTGAGGCAACCCAAACCTGTGATATATTTTTCGTATTTAATTATTTGATTTTTCACCTAATTTTATTTGTTCTTTTCGATCTGTTCTGTTTCTATGGCCTAGCTAAGATGTTATTGTGACGAGAATCTTTAACAGCAGTGGCACTGAGTGGATTTNTGATTTACTGTATATATAACCTACAAAAATGAATGAGCTGAGTCAAGATTATAATAATATGTGTAATTCATAAGATAAAATTGGATGGTTCGGTGGTGTTTAACAAGTATATGGAGAGAAATAATTTATAACAAGGCAATGATTGAAACGTTTGTCCCTTTTCCCAGGAACATATTCCAGTAGAGGAAGTGTTTGAGCAGCTAAAATGTTCAAGGGCAGGTCTAACATCAGACGAAGGAGCCAGTCGGCTTCAAGTTTTCGGACCAAACAAATTGGAAGAGAAAAAGGAGAGCAAAGTGTTGAAGTTCTTGGGATTTATGTGGAACCCCTTATCTTGGGTCATGGAAGCTGCTGCCATAATGGCTATTGCTTTGGCCAATGGTGGAGGAAGGCCTCCGGATTGGCAGGATTTCGTGGGTATCATTACTCTTTTGGTCATTAACTCCACAATCAGTTTCATTGAGGAAAACAATGCTGGCAATGCTGCTGCTGCACTCATGGCTGGTTTAGCCCCCAAGACCAAGGTTCTCAGAGATGGCCGATGGACCGAACAAGATGCTGCAATTTTGGTCCCTGGTGACATAATCAGCATTAAATTAGGAGATATCATTCCTGCTGATGCTCGTCTTCTGGAGGGTGATGATTTGAGTGTTGATCAGTCTGCTCTAACAGGAGAATCTCTTCCAGCAACAAAGCACCCCCATGATGAAGTATTTTCTGGATCAACTGTTAAGAAAGGAGAGATAGAAGCAGTTGTGATTGCTACTGGTGTGCACACCTTTTTTGGTAAAGCGGCTCACTTGGTGGATAGCACCAACCAAGTTGGGCACTTTCAGAAAGTCCTCACAGCAATTGGTAATTTCTGCATTTGCTCAATTGCGGTTGGAATAGTCATTGAGCTCATAGTCATGTACCCAATACAACACCGCAAGTATAGAGATGGGATTGACAATCTGTTGGTGCTATTGATTGGAGGCATTCCGATTGCTATGCCAACTGTTTTATCTGTTACTATGGCTATTGGTTCTCANAGGCTTTCCCAACAAGGTGCAATTACAAAACGTATGACAGCTATTGAGGAAATGGCAGGGATGGACGTCCTCTGCAGTGACAAAACCGGGACTCTGACCCTAAATAAGTTGTCTGTTGATAAAAACTTGATTGAGGTCTTTGCTAAGGGTGTCGAGAAGGACCATGCACGAGCTGGTATCAGGGAGGTCCATTTTTTCCCATTCAATCCTGTAGACAAGAGGACTGCTCTAACCTACATTGATTCTGATGGAAGTTGGCATCGGTCTAGCAAAGGTGCTCCTGAGCAGATATTGAACCTCTGCAACAGCAAAGAGGATGTCAGGAAAAGAGTTCATGCAACAATTGACAAGTTCGCTGAGCGTGGACTCCGTTCTTTGGGTGTTGCTAGACAGGAAGTACCTGAGAAAACAAAAGATGCTCCTGGTGCACCGTGGCAACTTGTTGGTCTGTTACCACTATTTGATCCTCCTAGGCACGATAGTGCGGAAACCATCACAAGGGCTCTGAACCTTGGTGTGAATGTGAAGATGATTACTGGTGATCAACTTGCCATTGCCAAGGAAACTGGTCGAAGGCTTGGGATGGGAACAAACATGTACCCATCTTCTTCATTGCTTGGCCAAAGCAAGGATGCNTCTGTTTCAGCTCTTCCAGTTGATGAATTGATTGAGAAGGCTGATGGATTTGCTGGAGTATTTCCTGAGCACAAATATGAAATCGTTAAGAGGCTACAAGACAGAAAGCATATATGTGGAATGACAGGTGATGGTGTCAACGATGCTCCTGCATTAAAGAGAGCGGATATTGGAATTGCAGTTGCCGATGCTACAGATGCTGCTAGAAGTGCTTCTGATATTGTCCTCACAGAACCTGGTCTGAGTGTCATTATTAGTGCAGTGCTCACTAGCAGGGCGATTTTCCAAAGGATGAAGAACTATACTATCTATGCAGTGTCAATCACCATTCGTATTGTGTTTGGTTTCATGTTCATTGCGTTAATCTGGAAGTTTGATTTCGCACCCTTCATGGTGTTGATTATTGCCATACTAAATGATGGTACCATTATGACAATATCCAAGGATAGAGTGAAACCATCTCCACAACCCGACAGTTGGAAGCTGAAGGAGATATTTGCTACTGGTGTTGTGCTAGGTAGTTACATGGCACTAATGACGGTAGTATTCTTCTGGCTCATGAAGGATACCGACTTCTTCTCGGACAAGTTTGGTGTGAGGTCTTTGAGAAAAAACCCTGAGGAAATGATGGCTGCCCTGTACCTACAAGTCAGTATTATAAGCCAGGCTCTAATTTTTGTCACCAGGTCTCGTAGCTGGTCATATGTTGAAAGACCCGGTCTTCTCCTACTGGGTGCTTTTATGATTGCTCAGCTGGTGGCAACTTTTCTTGCCGTATATGCTAATTGGAGCTTCGCAAGAATTAAAGGGATGGGATGGGGTTGGGCTGGTGTAATCTGGTTGTATAGTCTGGTAACATATATCCCTCTTGATATACTCAAATTCGCAATTCGCTATGCTCTGAGTGGAAAAGCTTGGGATAATCTTTTAGAGAACAAGACTGCCTTCACTACGAAGAAAGACTATGGCAAAGAAGAGAGAGAAGCACAGTGGGCAACTGCCCAAAGAACTCTTCATGGTCTTCAGCCACCTGAAACAACCAGCATTTTCAATGACAAGAATAGCTATAGGGAGCTTTCAGAGATTGCTGAGCAAGCCAAGAGACGTGCTGAGGTTGCAAGGCTCAGGGAGCTGCATACTCTAAAGGGACATGTCGAGTCAGTAGTGAAGCTGAAGGGACTTGACATCGATACAATCCAGCAACATTATACTGTTTAAGGAGCTTGGAAAACCTTGAAGAAGAACCCAATTACGTGCTTGTTCAAGAACAAAAACAACAAATACAATGGTGAAGACCTAAGTCAATCTGTCTTTAGATTAGGATGAAGGTCCTTTTGTGAAAAATTGAATGGTTACTCCTCTATTCCCTCTGTGCCAGTAGCAGGCAGAGGAGGATGCTATTCTCTTAGGTACCAAATAACATGGTTGATAGGATTTACTTACGTCTTATTTTGGGGAATGTTAATGACAATAAGGTCATAATAACGCTCTATATATTTTTTTTGGCTGAACAAGGCTCAATATGTTTTCGGTCTTGATTAATGTTGCT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00101	113	5335	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K01535	PMA1, PMA2	EC:3.6.3.6	Oxidative phosphorylation	map00190

Gene Ontology

cellular_component
GO:0016021 integral component of membrane

molecular_function

GO:0000166 nucleotide binding

GO:0046872 metal ion binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000101s00010287.1	PF00122.15	E1-E2_ATPase	34	255	3.90E-58
Glyur000101s00010287.1	PF00702.21	Hydrolase	259	506	3.70E-23

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	26.851
SRR1783600	control	26.807
SRR1783602	moderate drought stress	35.857
SRR1811619	moderate drought stress	35.769

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	65.700
DRR006520	Root Summer glycyrrhizin high producing strain	65.921
DRR006521	Root Winter glycyrrhizin high producing strain	9.547
DRR006522	Root Winter glycyrrhizin high producing strain	9.235
DRR006523	Root Summer glycyrrhizin low producing strain	91.067
DRR006524	Root Summer glycyrrhizin low producing strain	91.245
DRR006525	Leaf Summer glycyrrhizin high producing strain	165.043
DRR006526	Leaf Summer glycyrrhizin high producing strain	164.469

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	89.933
SRR2868004	Drought Stress (root)	99.632
SRR2967015	Control (root)	96.025

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	235.418
SRR9715740	Leaf	217.982
SRR9715741	Leaf	251.946
SRR9715739	Root	11.689
SRR9715742	Root	112.298
SRR9715743	Root	96.588

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	9.580
SRR8749028	MeJA induced 9h	21.367
SRR8749029	MeJA induced 9h	14.238
SRR8749030	Uninduced	7.123
SRR8749031	Uninduced	7.217
SRR8749032	Uninduced	5.329

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	60.272
SRR8400027	Control - Root	57.236