Gene detail information of Glyur000100s00008373 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G63930.1 | 2.00E-112 | from the Czech 'roh' meaning 'corner' |
| NR | XP_004503676.1 | 0 | PREDICTED: uncharacterized protein LOC101515352 [Cicer arietinum] |
| trEMBL | tr|A0A072TUL8|A0A072TUL8_MEDTR | 0 | Plant/F1M20-13 protein {ECO:0000313|EMBL:KEH21127.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00100 | 155209 | 156393 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000100s00008373.1 | PF05633.6 | DUF793 | 6 | 383 | 1.90E-151 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.969 |
| SRR1783600 | control | 1.933 |
| SRR1783602 | moderate drought stress | 1.116 |
| SRR1811619 | moderate drought stress | 1.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.358 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.398 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.035 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.041 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.760 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.046 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.393 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.947 |
| SRR2868004 | Drought Stress (root) | 24.125 |
| SRR2967015 | Control (root) | 19.286 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 64.231 |
| SRR9715740 | Leaf | 70.365 |
| SRR9715741 | Leaf | 80.810 |
| SRR9715739 | Root | 17.768 |
| SRR9715742 | Root | 20.974 |
| SRR9715743 | Root | 22.552 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.570 |
| SRR8749028 | MeJA induced 9h | 4.748 |
| SRR8749029 | MeJA induced 9h | 4.756 |
| SRR8749030 | Uninduced | 40.064 |
| SRR8749031 | Uninduced | 15.916 |
| SRR8749032 | Uninduced | 14.759 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.127 |
| SRR8400027 | Control - Root | 15.335 |