Gene detail information of Glyur000100s00008371 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G01490.2 | 2.00E-25 | Heavy metal transport/detoxification superfamily protein |
| NR | KHM99946.1 | 1.22E-62 | Putative late blight resistance protein like R1B-19 [Glycine soja] |
| Swissprot | tr|Q6L440|R1A3_SOLDE | 6.00E-09 | Putative late blight resistance protein homolog R1A-3 |
| trEMBL | tr|I1K6E3|I1K6E3_SOYBN | 5.00E-63 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G37420.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00100 | 144220 | 146163 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000100s00008371.1 | PF00403.21 | HMA | 6 | 59 | 2.00E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.951 |
| SRR1783600 | control | 5.843 |
| SRR1783602 | moderate drought stress | 3.447 |
| SRR1811619 | moderate drought stress | 3.594 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.398 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.532 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.665 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.651 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 65.856 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 66.335 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.097 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.096 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 66.896 |
| SRR2868004 | Drought Stress (root) | 71.266 |
| SRR2967015 | Control (root) | 79.913 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.343 |
| SRR9715740 | Leaf | 34.223 |
| SRR9715741 | Leaf | 21.218 |
| SRR9715739 | Root | 0.141 |
| SRR9715742 | Root | 4.672 |
| SRR9715743 | Root | 3.777 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 43.422 |
| SRR8749028 | MeJA induced 9h | 70.541 |
| SRR8749029 | MeJA induced 9h | 107.292 |
| SRR8749030 | Uninduced | 48.998 |
| SRR8749031 | Uninduced | 31.750 |
| SRR8749032 | Uninduced | 17.013 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.639 |
| SRR8400027 | Control - Root | 10.640 |