Gene detail

Gene detail information of Glyur000100s00008351

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G23640.1	3.00E-103	Potassium transporter family protein
NR	KEH21165.1	0	potassium transporter-like protein [Medicago truncatula]
COG	YP_003050709.1	2.00E-29	K potassium transporter [Methylovorus glucosetrophus SIP3-4]
Swissprot	tr\|Q9FE38\|POT3_ARATH	2.00E-137	Potassium transporter 3
trEMBL	tr\|A0A072U5N7\|A0A072U5N7_MEDTR	0	Potassium transporter {ECO:0000256\|RuleBase:RU321113}

Sequence

Transcript Sequence

>Glyur000100s00008351.1
ATGTTTTTGTTATTTTGTAGATATCCTATTTTGCCAGTATTCGTGGTGGCTGTCTTGGCGGCAATAGTTGCAAGTCAGGCTGTCATCTCTTCAACATTCTCAATTGTCCAACAATGCCATGCATTCGAATGTTTCCCTCGTATTAAGGCAGTACATTCCAGAAGGTGGATCCATGGACAGACATATATACCGGAGATAAACTGGATTCTTATGATAATCAGCCTGGCTGTGACAGTTGGTTTTGGAGACACAAACCATATAGGATATGCTTATGGTAAGGATTGCATGTCTGATTGGGACGTTTGTGACCACATGGTTGACATCACTAGTCATCAGCCTTGTATGGCATCAAAGTCTTATAGTTGCTCTGACATTTCTTTTATTCTTTGGTTCTATAGAGGTTCTCTTCTTTTCATCTTATTGATGAAAATCCCGAAAGGTGGCTGGGTTCCGATTGTGCTCTCCATAGTCTTCATGGTTGTTATGCACGTGTGGCATTATGGTTCTAGAAAAAAGTATTTATTTGATATGCATAACAAAGTTTCAATGAGGTCGATCCTTACACTGGGTCCTAGTCTTGGGATTGTTAGGGTTCCAGGAATGGGCCTTATCTATACTGAATTGGCTACTGGAGTCCCTGCCAGTTTTACTCATTTCTTGACAAATCTGCCAGCTTTCTACCAAGTGGTTGTTTTTGTTTGTGTTAAGACTGTACCTGTGCCTTGTGTGCCCCATGCAGAACGTTATCTCATTGGCCGAATTGGTCCCAAATCCTATCGGTTGTATCGGTGCATTGTTCGAAATGGCTATAAAGATGTTTATAGCCATGAAAATGATTTTGAAAATGACCTGGTGATGAGCATAGCAGAATTCATTCAATTGGAAGCTGAAGGTTGTTCTGGAAACCTAGATGGTTCTGCAGATGGCCGAATGGCAGTGGTTAGGACGTCTGGGAAGTTTGGGACAAGATTGCGAATGTCAGAACCTGCTGGTTCTGATGAAAGCAGCGGTACTAGTCTTCCTGGAGCTTTGACTGTTACTGACAGTAAATCTCCAACGTTGAAGAAGCTGCAGGCCATGTATGAGCAGGAATCGGCGCTGAACTAAACACTAGACGAAGGATTAGATTTGAGTTGCTAAATACAATATATATAGATCCACGTGTCAAGGAAGAGCTCATGGAACTTGTGGAAGCCAAGCGTGTTGGAGCAGCATATGTAATAGGTCATTCTCACGTAAAGGCCAAGTGGAATTCTTCAGTCATGAAGAGGTTTGCTATCAACCTCTACTCTTTTCTCCGAAAAAATTGCCGGTCCCCTGCTGTTGGGCTAAACATTCCTCAGACTTGTCTGATTAAGGTAGGAATGAATTACCATGTCTAGCATTGCTGACAGTATCTGACTGGGGATATAATTTATGCATGCTAGAAAGAATGCCCGTGGGCTTCCACGACAGGCAATATTATGCTACATTGGTAGATTCTACTTAAATGGATGTCACTCAAGAATCTCCTCTTGGCATGTTCTAAGAAAGAGCTGCATGAAGATTTTTTGATCTGTGATGTAAAATTACTAACTTGTTGGATAAGGAGTCATGTTGGGGGTCCTGTACCTGTTTATTGTGTTTGAGCTTCCCAAATTACACTTGAAAGTCACGTCTGTCTTAATGGCTTCGCTCTAGTTTTGTTAAATATTTTGCATGTAAAGCATCTAATGCAGCCTTTGTACCTGTATGGAAATGGAAATTTCTTTTGGTCGTATTTGTAATCGTCCTCTGCGAAAGAAAGAAGGAAATGATAACCATACATACATACATG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00100	6869	9163	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0071805 potassium ion transmembrane transport

cellular_component
GO:0016020 membrane

molecular_function
GO:0015079 potassium ion transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000100s00008351.1	PF02705.11	K_trans	8	272	4.70E-58

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.890
SRR1783600	control	3.950
SRR1783602	moderate drought stress	2.018
SRR1811619	moderate drought stress	1.990

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	6.216
DRR006520	Root Summer glycyrrhizin high producing strain	6.420
DRR006521	Root Winter glycyrrhizin high producing strain	4.552
DRR006522	Root Winter glycyrrhizin high producing strain	4.185
DRR006523	Root Summer glycyrrhizin low producing strain	5.166
DRR006524	Root Summer glycyrrhizin low producing strain	5.472
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.125
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.098

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	12.260
SRR2868004	Drought Stress (root)	14.170
SRR2967015	Control (root)	13.483

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.388
SRR9715740	Leaf	1.289
SRR9715741	Leaf	1.664
SRR9715739	Root	0.266
SRR9715742	Root	1.265
SRR9715743	Root	1.211

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.745
SRR8749028	MeJA induced 9h	2.394
SRR8749029	MeJA induced 9h	3.239
SRR8749030	Uninduced	3.765
SRR8749031	Uninduced	4.698
SRR8749032	Uninduced	5.145

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.203
SRR8400027	Control - Root	1.441