Gene detail information of Glyur000099s00014962 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G65280.1 | 9.00E-149 | GCR2-like 1 |
| NR | XP_004502406.1 | 0 | PREDICTED: lanC-like protein 2-like [Cicer arietinum] |
| COG | YP_007515942.1 | 3.00E-09 | lanthionine synthetase C-like protein [Bradyrhizobium oligotrophicum S58] |
| Swissprot | tr|Q9FJN7|GCL1_ARATH | 0 | LanC-like protein GCL1 |
| trEMBL | tr|G7J384|G7J384_MEDTR | 0 | G protein coupled receptor {ECO:0000313|EMBL:AES72177.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00099 | 267906 | 273874 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000099s00014962.1 | PF05147.8 | LANC_like | 33 | 390 | 1.90E-81 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.399 |
| SRR1783600 | control | 9.211 |
| SRR1783602 | moderate drought stress | 9.382 |
| SRR1811619 | moderate drought stress | 9.246 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 66.413 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 66.207 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1585.163 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1547.689 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 104.672 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 104.405 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.362 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.128 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 43.247 |
| SRR2868004 | Drought Stress (root) | 34.129 |
| SRR2967015 | Control (root) | 73.856 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.247 |
| SRR9715740 | Leaf | 5.254 |
| SRR9715741 | Leaf | 7.861 |
| SRR9715739 | Root | 5.206 |
| SRR9715742 | Root | 25.910 |
| SRR9715743 | Root | 24.462 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 270.474 |
| SRR8749028 | MeJA induced 9h | 845.253 |
| SRR8749029 | MeJA induced 9h | 825.449 |
| SRR8749030 | Uninduced | 910.327 |
| SRR8749031 | Uninduced | 864.345 |
| SRR8749032 | Uninduced | 1404.293 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 37.333 |
| SRR8400027 | Control - Root | 34.040 |