Gene detail

Gene detail information of Glyur000099s00014961

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G40010.1	4.00E-89	SNF1-related protein kinase 2.7
NR	XP_004502407.1	5.16E-153	PREDICTED: serine/threonine-protein kinase SAPK2-like isoform X1 [Cicer arietinum]
COG	YP_004862245.1	4.00E-15	protein kinase domain-containing protein [Candidatus Chloracidobacterium thermophilum B]
Swissprot	tr\|Q75LR7\|SAPK1_ORYSJ	6.00E-125	Serine/threonine-protein kinase SAPK1
trEMBL	tr\|A0A072V0R0\|A0A072V0R0_MEDTR	2.00E-149	Serine/Threonine-kinase SAPK1-like protein {ECO:0000313\|EMBL:KEH35291.1}

Sequence

Transcript Sequence

>Glyur000099s00014961.1
GTTGAAATTTGGAGGCCATAAAGAGAAGAAGGAGATGCTCCACAAATAGAGGGAGAAGAATTGTTCAATTTAATTGCTAGCTCATATATATATATATTCTTCAATACAATAACACTCTGTTGTTGGGTACTGTTAGCTCGATCGTGCTTGAAAGTTGAAACTTTATGTAACAATGGAAGAACGGTATGAGATTGTTAAAGATATTGGGTCGGGGAATGTCGGGGTAGCAAAGCTGGTAAGGGATAAGCAGAGTGGTGAGCTATATGCTGTCAAGATCATTGACAGGGGCCTAAAGATTGATGAACACGTGCAAAGGGAGATTATAAATCACAGGTCCTTGAAACATCCCAATATCATTAGATTTAAGGAGGTGCTGTGTACTCCAACTCATCTAGCCATAGTCATGGAATATGCTGCAGGGGGAGAACTATTTGGAAGAATATGCAATGCTGGTAGATTCGGTGAGGACGAGGCAAGATATTTCTTCAGGCAATTGATTTCTGGAGTCAGCTATTGCCATTCAATGTCATCTGTTCTACATTCCCAGCCTAAATCTACCGTGGGAACCCCAGCATATATTGCACCAGAGGTTGCTGATGTTTGGTCTTGTGGGGTGACCTTATATGTGATGCTAGTTGGAGGTTATCCTTTTGAAGATCCAGATGATCCACTAAACTTCAGAAAGACACTTCAGCGAATTCTTGGGGTCCACTATTCTGTTCCAGACTATAGAATCACCATCCCAGAAATTAAAAAGCACCCATGGTTCCTTAATAAATTGCCAAAGGAATTTATGGAGGAATTAGGGGAAGAAGAAAAGAAGCAAAATGATGTGAAGGGTGTGGATGATGATGATTCATATCAAACTCAGAGCATTGAGGAAATACTGTCCATAATTCAAGAGGCACGGAAGCCAGGTGAGGGCCCAAAAGTGGATGGGCAATTTGTGGGAGGGGGCATGGATCCTGATGAGATGGATGAATATGATGATTTAGATGATATGGAAACAAGTGACGATTTTGATTTTGTCTGTGAAGTGTGAGTGTGTTAGTTTTTTTTTAATTGTTTGTTTGTCAAATGAGTGTGTTAGGTTATGAATTTGCATTTTGCCTTGCTGANCAATTGTCTCTTCAATGGATTTTGATTTTCCTCTGATTAGAAGTTGCTTGTCTTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00099	260501	264382	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.2.4

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K14498	SNRK2	EC:2.7.11.1	MAPK signaling pathway - plant	map04016
			MAPK signaling pathway - plant	map04016
			Plant hormone signal transduction	map04075
			Plant hormone signal transduction	map04075

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000099s00014961.1	PF00069.20	Pkinase	5	123	4.80E-26
Glyur000099s00014961.1	PF00069.20	Pkinase	124	176	2.90E-06
Glyur000099s00014961.2	PF00069.20	Pkinase	5	102	2.00E-17
Glyur000099s00014961.2	PF00069.20	Pkinase	105	159	1.70E-06

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.694
SRR1783600	control	0.703
SRR1783602	moderate drought stress	1.151
SRR1811619	moderate drought stress	1.266

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.233
DRR006520	Root Summer glycyrrhizin high producing strain	3.407
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	1.989
DRR006524	Root Summer glycyrrhizin low producing strain	1.985
DRR006525	Leaf Summer glycyrrhizin high producing strain	17.543
DRR006526	Leaf Summer glycyrrhizin high producing strain	17.399

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	31.883
SRR2868004	Drought Stress (root)	69.276
SRR2967015	Control (root)	66.182

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	31.072
SRR9715740	Leaf	28.041
SRR9715741	Leaf	37.696
SRR9715739	Root	0.619
SRR9715742	Root	0.536
SRR9715743	Root	0.485

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.145
SRR8749028	MeJA induced 9h	5.774
SRR8749029	MeJA induced 9h	2.089
SRR8749030	Uninduced	6.545
SRR8749031	Uninduced	13.241
SRR8749032	Uninduced	6.242

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	4.770
SRR8400027	Control - Root	6.369