Gene detail information of Glyur000099s00014953 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G10310.1 | 5.00E-21 | |
| NR | AFK44480.1 | 7.15E-55 | unknown [Lotus japonicus] |
| Swissprot | tr|Q9LFT5|EPFL1_ARATH | 6.00E-26 | MEPFL1 {ECO:0000305} (Precursor) |
| trEMBL | tr|I3SW38|I3SW38_LOTJA | 3.00E-55 | Uncharacterized protein {ECO:0000313|EMBL:AFK44480.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00099 | 201828 | 202490 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.403 |
| SRR1783600 | control | 4.195 |
| SRR1783602 | moderate drought stress | 1.647 |
| SRR1811619 | moderate drought stress | 1.481 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.363 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.734 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.663 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.669 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.872 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.869 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.468 |
| SRR9715740 | Leaf | 0.526 |
| SRR9715741 | Leaf | 0.682 |
| SRR9715739 | Root | 0.300 |
| SRR9715742 | Root | 0.363 |
| SRR9715743 | Root | 0.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.288 |
| SRR8749028 | MeJA induced 9h | 0.636 |
| SRR8749029 | MeJA induced 9h | 0.368 |
| SRR8749030 | Uninduced | 0.618 |
| SRR8749031 | Uninduced | 0.505 |
| SRR8749032 | Uninduced | 0.969 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.724 |
| SRR8400027 | Control - Root | 1.696 |