Gene detail information of Glyur000099s00014950 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G22360.1 | 2.00E-55 | DNAJ heat shock family protein |
| NR | KHN31383.1 | 8.16E-120 | Chaperone protein DnaJ [Glycine soja] |
| COG | NP_681579.1 | 3.00E-34 | molecular chaperone DnaJ [Thermosynechococcus elongatus BP-1] |
| Swissprot | tr|Q04960|DNJH_CUCSA | 5.00E-20 | DnaJ protein homolog (Precursor) |
| trEMBL | tr|I1LNJ9|I1LNJ9_SOYBN | 1.00E-94 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G38040.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00099 | 191644 | 196657 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000099s00014950.1 | PF00226.26 | DnaJ | 85 | 146 | 2.60E-28 |
| Glyur000099s00014950.1 | PF01556.13 | CTDII | 215 | 294 | 3.70E-23 |
| Glyur000099s00014950.2 | PF00226.26 | DnaJ | 85 | 146 | 2.60E-28 |
| Glyur000099s00014950.2 | PF01556.13 | CTDII | 215 | 294 | 3.70E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.819 |
| SRR1783600 | control | 15.734 |
| SRR1783602 | moderate drought stress | 12.840 |
| SRR1811619 | moderate drought stress | 12.565 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 22.246 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 21.529 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.913 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.120 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.907 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.092 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 46.404 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 46.029 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.068 |
| SRR2868004 | Drought Stress (root) | 21.789 |
| SRR2967015 | Control (root) | 18.229 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 56.214 |
| SRR9715740 | Leaf | 93.043 |
| SRR9715741 | Leaf | 64.002 |
| SRR9715739 | Root | 7.799 |
| SRR9715742 | Root | 16.111 |
| SRR9715743 | Root | 17.440 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.795 |
| SRR8749028 | MeJA induced 9h | 16.006 |
| SRR8749029 | MeJA induced 9h | 8.730 |
| SRR8749030 | Uninduced | 11.113 |
| SRR8749031 | Uninduced | 5.541 |
| SRR8749032 | Uninduced | 6.642 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 31.497 |
| SRR8400027 | Control - Root | 32.146 |