Gene detail information of Glyur000099s00014939 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G12910.1 | 2.00E-10 | Transducin/WD40 repeat-like superfamily protein |
| NR | KHN46371.1 | 1.50E-12 | WD repeat-containing protein LWD1 [Glycine soja] |
| Swissprot | tr|Q9LPV9|LWD1_ARATH | 3.00E-12 | WD repeat-containing protein LWD1 |
| trEMBL | tr|I1ML65|I1ML65_SOYBN | 5.00E-13 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G04930.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00099 | 129860 | 130123 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.339 |
| SRR1783600 | control | 1.636 |
| SRR1783602 | moderate drought stress | 3.712 |
| SRR1811619 | moderate drought stress | 3.796 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.438 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.858 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.593 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.567 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.764 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.427 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.117 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.176 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.480 |
| SRR2868004 | Drought Stress (root) | 4.749 |
| SRR2967015 | Control (root) | 6.573 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.736 |
| SRR9715740 | Leaf | 0.701 |
| SRR9715741 | Leaf | 0.124 |
| SRR9715739 | Root | 2.211 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 1.045 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.785 |
| SRR8749028 | MeJA induced 9h | 1.818 |
| SRR8749029 | MeJA induced 9h | 1.146 |
| SRR8749030 | Uninduced | 1.207 |
| SRR8749031 | Uninduced | 0.307 |
| SRR8749032 | Uninduced | 0.849 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.268 |
| SRR8400027 | Control - Root | 0.497 |