Gene detail information of Glyur000099s00014936 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G61900.1 | 3.00E-27 | SAUR-like auxin-responsive protein family |
| NR | NP_001240001.1 | 3.36E-42 | uncharacterized protein LOC100808516 [Glycine max] |
| Swissprot | tr|P33080|AX10A_SOYBN | 4.00E-13 | Auxin-induced protein X10A |
| trEMBL | tr|K7KZR6|K7KZR6_SOYBN | 6.00E-44 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G05770.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00099 | 113326 | 113721 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000099s00014936.1 | PF02519.9 | Auxin_inducible | 17 | 104 | 3.10E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.117 |
| SRR1783600 | control | 16.298 |
| SRR1783602 | moderate drought stress | 11.693 |
| SRR1811619 | moderate drought stress | 11.987 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.760 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.786 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 30.595 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 27.019 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 77.768 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 73.723 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 37.529 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 39.710 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.994 |
| SRR2868004 | Drought Stress (root) | 16.396 |
| SRR2967015 | Control (root) | 15.725 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.088 |
| SRR9715740 | Leaf | 11.152 |
| SRR9715741 | Leaf | 17.280 |
| SRR9715739 | Root | 5.482 |
| SRR9715742 | Root | 2.147 |
| SRR9715743 | Root | 3.187 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.525 |
| SRR8749028 | MeJA induced 9h | 44.689 |
| SRR8749029 | MeJA induced 9h | 15.228 |
| SRR8749030 | Uninduced | 21.788 |
| SRR8749031 | Uninduced | 70.889 |
| SRR8749032 | Uninduced | 32.245 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.329 |
| SRR8400027 | Control - Root | 4.524 |