Gene detail

Gene detail information of Glyur000098s00008022

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G57390.1	2.00E-109	AINTEGUMENTA-like 5
NR	XP_003541472.1	0	PREDICTED: AP2-like ethylene-responsive transcription factor AIL5-like [Glycine max]
Swissprot	tr\|Q6PQQ3\|AIL5_ARATH	1.00E-138	AP2-like ethylene-responsive transcription factor AIL5
trEMBL	tr\|I1LVQ8\|I1LVQ8_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G00950.1}

Sequence

Transcript Sequence

>Glyur000098s00008022.1
GCTGAGCTTCATCAGCAGAGTCTCTTTCTCTCTCTTAGACCAGACCACCTCTATATCTGTGTCATAATCTCCCCACTTCTTCTTCAACCTCTCTCTCTCTCTCTCTCTCTCACACACAAATACTAGATTCTCCTTATAAGATCGCAGTTTCCAAAGAAAACCAAAACTGAAGTTCAACGCCATAATCCTCTCTTTCACGTTCCTCCACGACCACACCCACACATAAAACAACAAAGCCAATATGGACTCTTCCTCTTCCTCACCACCGCACCAAAACAACAACAACAACTCCCTCCCTTTCTCTCTCTCCAATCCCTTTCCCAATCCCTCTCCTCCTTCCCACTCTTCTTCTCACCTCTCCCTTTTCCACTCCTTCACCTATCCCCCTTCAACACCATCTCTCACCCTCACAGGAAGCTGCAACACCGTGGACGTATCGCNGGAGGCAACCGACGGCGCCGTCGGAGGAGCAACCAAACTCTCCATATTCAGCGGTGGTCCCAAGTTCGAGGACTTTCTGGGGGGCTCCGTGGCGGCGGCAACAACAACCACCGCCACGTGTGCACCTACACAGCTTCCTCAGTTCTCCACNACCGACAGCGACCTTTACGATTCGGAGCTGAAGACAACAATAGCGGCATGCTTCCCTCGCGGCTTCGGCGCCACCGAACCAACCTCCGAACCTCAAAAGCCTTCCCCCAAGAAAACCGTCGACACCTTCGGCCAACGCACCTCCATCTACCGCGGCGTCACCCGACATAGATGGACTGGGAGATACGAAGCTCATCTGTGGGATAACAGTTGCAGAAGGGAAGGACAAAGTAGGAAAGGAAGACAAGGTGGCTATGACAAGGAAGAGAAGGCAGCTAGAGCTTATGATCTAGCAGCTCTCAAGTACTGGGGTCCAACCACCACCACCAACTTCCCTATTTCCAACTATGAGAAGGANCTGGAGGAAATGAAGAACATGACCAGACAAGAGTTTGTTGCTTCTCTACGAAGGAAGAGCAGTGGTTTCTCAAGGGGAGCCTCTATTTACAGAGGAGTGACGAGGCACCACCAGCATGGGCGATGGCAGGCAAGAATAGGCAGAGTNGCCGGAAACAAAGACCTTTACCTTGGCACTTTCAGCACCCAAGAAGAAGCTGCGGAGGCCTATGACATTGCGGCGATCAAATTCAGGGGACTAAANGCAGTGACAAACTTCGACATGAGTCGTTATGACGTGAAGAGCATTGCAAGCAGCACTCTTCCAATTGGGGGTTTATCTAATAATAGCAAGAACAACAAAAACTCCACTACTACAGATTCTGGATCGGAGAGCAAAAGCCAAGATGAACAACAACGAGATCATCATCATCATCATCCATCCTCAGCTTCAGCTTTATCAGTAGTATCACACCAATTACCTTCAACCTCAACCTTAAGCTTTGCCATACCCATAAAGCAAGACCCTTCAGACAATAATAATAATAATAATAATAATAATTACTGGTCCAATATCCTCGGCTACCACCACAATAACAATAACAATAACCCTCCCACCACAGTAGTACCCTTCCACGTGGACTTCTCCTCCACTGCCCCCTCAAACACCAACAGCAGCAACAATGCCTCGTTTTTCAGTGGTTCTTCTTCGAGTAGTTCAATAATCCCATTTGCCACGCCTATGTTTTCCTTAAATAGTAATGGGGGTTATGATCAGAGCGGTGGTGGTGGTGCTGGTGGTGGTTATGGGAACTGGATAGGACCTACTACACTGCACACATTCCAAACCCATCATCATCATGCAGCAAAACCAAGTCTGTTTCAAACGCCAATATTTGGAATGGAATGAGCTAATGCTACCTGCAGGTGGGTGTGGAATGAGAATCTGTGCATTTGAATAAATGATGAAAGGGGAAGAACTGAAGGACACGCAGTGGTGAATGGTGATGGTGTCTTTACTTACACTCTTCAGGAGGAGGAAGGGACACGAATGAATGAGTAGTCTTTAGGATGATCAGAGAGTATGAGTTGGGACTGACAAAATGGTAATTTCATGAGATGATAACACCGTAGTTAATACCTATCTAGCTGACACTCTGTACTAACTCAAAACTTCCTTTGTTCAAGTAGTCTTGCTATAAATTTCCCTTTTTCCTTTTTGAATTTTCGTTTTTTTTGTTGTTGC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00098	344004	347786	+

Gene family

Gene family	subfamily
Transcription Factors Family	AP2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function

GO:0003677 DNA binding

GO:0003700 transcription factor activity, sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000098s00008022.1	PF00847.15	AP2	165	221	3.50E-09
Glyur000098s00008022.1	PF00847.15	AP2	264	315	1.80E-12

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.492
SRR1783600	control	3.471
SRR1783602	moderate drought stress	6.008
SRR1811619	moderate drought stress	5.624

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.838
DRR006520	Root Summer glycyrrhizin high producing strain	1.835
DRR006521	Root Winter glycyrrhizin high producing strain	12.163
DRR006522	Root Winter glycyrrhizin high producing strain	11.739
DRR006523	Root Summer glycyrrhizin low producing strain	5.495
DRR006524	Root Summer glycyrrhizin low producing strain	5.423
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.519
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.506

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	16.946
SRR2868004	Drought Stress (root)	12.149
SRR2967015	Control (root)	20.773

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.973
SRR9715740	Leaf	0.058
SRR9715741	Leaf	0.399
SRR9715739	Root	0.802
SRR9715742	Root	4.043
SRR9715743	Root	2.840

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	117.503
SRR8749028	MeJA induced 9h	198.437
SRR8749029	MeJA induced 9h	144.738
SRR8749030	Uninduced	42.092
SRR8749031	Uninduced	56.810
SRR8749032	Uninduced	62.086

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	9.895
SRR8400027	Control - Root	10.800