Gene detail information of Glyur000098s00008017 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G57410.3 | 2.00E-168 | Afadin/alpha-actinin-binding protein |
| NR | XP_004507860.1 | 0 | PREDICTED: interaptin-like isoform X2 [Cicer arietinum] |
| trEMBL | tr|I1LVR1|I1LVR1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G00980.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00098 | 319949 | 325217 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000098s00008017.1 | PF11559.3 | ADIP | 70 | 217 | 5.20E-43 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.124 |
| SRR1783600 | control | 12.059 |
| SRR1783602 | moderate drought stress | 7.515 |
| SRR1811619 | moderate drought stress | 7.508 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.488 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.945 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.032 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.709 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.310 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.485 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.682 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.805 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.332 |
| SRR2868004 | Drought Stress (root) | 13.787 |
| SRR2967015 | Control (root) | 11.375 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.315 |
| SRR9715740 | Leaf | 5.500 |
| SRR9715741 | Leaf | 2.883 |
| SRR9715739 | Root | 2.165 |
| SRR9715742 | Root | 5.047 |
| SRR9715743 | Root | 4.541 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 30.943 |
| SRR8749028 | MeJA induced 9h | 23.477 |
| SRR8749029 | MeJA induced 9h | 21.031 |
| SRR8749030 | Uninduced | 5.147 |
| SRR8749031 | Uninduced | 4.096 |
| SRR8749032 | Uninduced | 2.263 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 30.965 |
| SRR8400027 | Control - Root | 32.625 |