Gene detail

Gene detail information of Glyur000098s00008016

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G30210.2	0	P450 reductase 2
NR	BAG68945.1	0	cytochrome P450 reductase [Lotus japonicus]
COG	YP_002315947.1	5.00E-84	Sulfite reductase subunit alpha [Anoxybacillus flavithermus WK1]
Swissprot	tr\|Q05001\|NCPR_CATRO	0	NADPH--cytochrome P450 reductase
trEMBL	tr\|B5BSX2\|B5BSX2_LOTJA	0	NADPH--cytochrome P450 reductase {ECO:0000256\|PIRNR:PIRNR000208}

Sequence

Transcript Sequence

>Glyur000098s00008016.1
GTTAAGGGTGTAGTAGTAGGTGGATTTGACTGGTCTGGGTTGGTAGGCGTTGGTTCAATGAAGCAAGGTCGCATTGTTTCCCTCGCAACACAAGTCTCAACAATATAACCCCCTTCCATTCCCTCTACCCATTTCCCTCTTCAGAGTCTCTCTCTCTCTTGAAGCTCTCAACTACTTCGCANCTACCAACTCCCGAGACGAGAGAGTNCTCTTTCTTCAATTCACGTTCCTCTCGCTTCCTCAATCAACCACACACNCACCATGCAGGATTCAAACTCCATGAAGATTTCGCCGCTGGATCTGATGTCGGCCATAATTAAGGGGAAGCTGGACCCATCCAACGTGTCGTCGCAGCAGNTACCGGCCTCTATCTTACTCGAGAACCGCGAGTTCGTCATGGTGCTTACCACATCCATCGCCGTTCTCATCGGCTGCGTCGTCGTTTTGATTTGGCGCAGATCCAACGCCAACAACAAGCCCAAGCCCATTGAGGTCCCCAAACGCATCCTCGAGAAGCTCCCTGAGATTGAAGTCGACGACGGCACCAAAAAGGTCACCATCTTCTTCGGCACCCAAACCGGCACCGCTGAAGGATTCGCCAAGGCGATATCGGAAGAGGCAAAAGCGCGATACGACAAGGCCACGTTTAAAGTCGTCGATTTGGACGATTATGCGNCCGACGACGATGAGTACGAGGAAAAATTCCAAAAGGAGACACTCGCACTTTTCTTTTTAGCTACATATGGTGATGGTGAGCCAACGGATAATGCGGCGAGATTTTATAAATGGTTTACGGAGGGAAATGAGAAAGGAGAAGATTGGCTTAAGAATCTTCAGTATGGTGTGTTTGGACTCGGGAACAGGCAGTATGAGCATTTTAACAAGGTGGCAAAGGTAGTGGATGAGATGCTTGCTGAGAAAGGTGGGAAGCGTCTNGTCCCAGTGGGTCTAGGAGATGATGATCAATGCATAGAGGATGACTTTACTGCATGGAAAGAAGAACTGTGGCCAGCACTTGATCAATTGCTTAGAGATGAGGACGATTCAACTGTGGCTACACCTTATACTGCTGCTGTTTTGGAGTACCGGGTTGTTATGCATGATCCATTAGATGCAACCATTGACGAAAAGTGGCATAATGTAAATGGCCATGCTGTTGTGGACGCTCAACATCCAGTCAGGGCAAATGTGGCTGTGCGAAGNGAGCTTCATACTTCTGTGTCGGATCGTTCTTGCACTCATTTAGAATTTGACATTTCAGGCACTGGAGTTGTATATGAAACAGGGGACCATGTTGGTGTTTTCTGTGAGAATTTATCCGAAACTGTGGAGGAGGCATTAAGATTACTAGGGCTGTCACCAGATACCTATTTCTCTGTTCATACCGATGACGAAGATGGGAAACCACTTGGTGGAGGCTCCTTACCACCTACTTTCCCACCCTGTACTTTAAGAACAGCACTTGCTCGATATGCAGATGTTTTGAGTTCACCCAAAAAGTCTGCTTTGCTTGCCTTAGCTGCTCATGCATCTGATCCATCTGAAGCTGATCGACTAAGACATCTTGCCTCACCTGCTGGAAAGGATGAATATGCAGAGTGGGTGATTGCCTCTCAAAGAAGTCTCCTTGAGGTCATGGCTGAATTTCCATCAGCCAAACCTCCAATCGGTGTATTTTTTGCAGCAGTTGCTCCTCGTCTGCAGCCAAGATATTATTCAATCTCATCATCTCCAAGAATGGCTTCATCCAGAATTCATGTTACTTGTGCGTTAGTGTGTGATAAAATGCCCACTGGTAGGATTCATAAAGGAGTGTGCTCAACTTGGATGAAGAATGCTGTGCCATTGGAGAAAAGCCAGGACTGTAGTTGGGCTCCTATCTTTGTTAGGCAGTCCAATTTCAGACTCCCTCCTGATAATAAAGTGCCTATAATCATGATAGGTCCTGGCACTGGGTTGGCTCCTTTCAGAGGTTTCTTGCAGGAAAGATTAGCTCTGAAAGAAGAAGGAGCTGAACTGGGCCCCTCTGTTTTATTTTTTGGATGCAGGAACCGTCAAATGGACTACATCTATGAAGACGAATTGAACCACTTCGTTAATAGTAGCGCGCTTGCTGAGCTCATTGTTGCCTTCTCANGAGAGGGACCTACCAAAGAATATGTGCAACATAAAATGATGGAGAAGGCTTCAGATATTTGGAACATGATATCTCAGGGAGCTTACATTTATGTGTGTGGTGATGCCAAAGGCATGGCTAGGGATGTACACCGCACTCTGCACACAATTTTGCAAGAGCAGGGTTCTCTCGATAGTTCCAAGGCCGAGAGCATGGTTAAGAACCTACAAATGTCTGGCAGGTATTTGCGTGATGTATGGTGATGACTACTACTTCAGAAGTATCACACATGTGGTAGCGAGGATTATAAAACGCGCGTAAAGACTAGTTGTTGTGGGTAGAAGATATATATATATATATATATTCGAAGGGCCTTATTTGTGTCGCCATCCACTGGTGCCCTCAAAAGAGGGAAGAGTGGGTTCTACCTGTTGCCTTTACGGCAACAATTCTTATGATTCTTTTTTCACTGTATTTTCAAATGGATTATTTTTTGGTTCGTGTAACTTATATATTACTTTGTTTATACCTAGATTATAAAGTATGTATTGTATGAACCCTATAAGAAGGGTTCAGAGACGCAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00098	303344	309222	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0003958 NADPH-hemoprotein reductase activity

GO:0005506 iron ion binding

GO:0010181 FMN binding

GO:0016491 oxidoreductase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000098s00008016.1	PF00258.20	Flavodoxin_1	100	244	1.40E-37
Glyur000098s00008016.1	PF00667.15	FAD_binding_1	300	522	2.70E-76
Glyur000098s00008016.1	PF00175.16	NAD_binding_1	559	669	1.40E-19

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	79.293
SRR1783600	control	79.207
SRR1783602	moderate drought stress	59.563
SRR1811619	moderate drought stress	58.709

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	50.884
DRR006520	Root Summer glycyrrhizin high producing strain	50.346
DRR006521	Root Winter glycyrrhizin high producing strain	102.301
DRR006522	Root Winter glycyrrhizin high producing strain	98.211
DRR006523	Root Summer glycyrrhizin low producing strain	55.459
DRR006524	Root Summer glycyrrhizin low producing strain	54.998
DRR006525	Leaf Summer glycyrrhizin high producing strain	56.930
DRR006526	Leaf Summer glycyrrhizin high producing strain	56.760

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	203.208
SRR2868004	Drought Stress (root)	266.141
SRR2967015	Control (root)	228.494

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	128.203
SRR9715740	Leaf	128.795
SRR9715741	Leaf	141.355
SRR9715739	Root	129.397
SRR9715742	Root	143.000
SRR9715743	Root	138.898

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	82.559
SRR8749028	MeJA induced 9h	129.108
SRR8749029	MeJA induced 9h	59.153
SRR8749030	Uninduced	173.186
SRR8749031	Uninduced	193.044
SRR8749032	Uninduced	90.691

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	175.777
SRR8400027	Control - Root	163.673