Gene detail information of Glyur000098s00008011 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G59970.1 | 1.00E-40 | Histone superfamily protein |
| NR | ACG30677.1 | 6.33E-65 | histone H4 [Zea mays] |
| Swissprot | tr|P0CG89|H4_SOYBN | 6.00E-66 | Histone H4 |
| trEMBL | tr|Q5NSW2|Q5NSW2_FRAAN | 4.00E-64 | Histone H4 {ECO:0000256|RuleBase:RU000528} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00098 | 273623 | 273934 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000098s00008011.1 | PF00125.19 | Histone | 29 | 94 | 1.00E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 51.555 |
| SRR1783600 | control | 52.505 |
| SRR1783602 | moderate drought stress | 85.388 |
| SRR1811619 | moderate drought stress | 85.741 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 92.516 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 95.336 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 91.057 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 89.561 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 112.141 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 115.177 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 53.779 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 53.607 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 400.763 |
| SRR2868004 | Drought Stress (root) | 413.664 |
| SRR2967015 | Control (root) | 388.820 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 185.745 |
| SRR9715740 | Leaf | 153.271 |
| SRR9715741 | Leaf | 158.440 |
| SRR9715739 | Root | 295.011 |
| SRR9715742 | Root | 163.478 |
| SRR9715743 | Root | 189.271 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 233.354 |
| SRR8749028 | MeJA induced 9h | 271.391 |
| SRR8749029 | MeJA induced 9h | 245.557 |
| SRR8749030 | Uninduced | 221.870 |
| SRR8749031 | Uninduced | 72.386 |
| SRR8749032 | Uninduced | 241.816 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 271.238 |
| SRR8400027 | Control - Root | 305.202 |