Gene detail information of Glyur000098s00007992 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G57500.1 | 8.00E-128 | Galactosyltransferase family protein |
| NR | KHN17589.1 | 0 | hypothetical protein glysoja_005786 [Glycine soja] |
| Swissprot | tr|Q9ASW1|B3GTG_ARATH | 5.00E-07 | Probable beta-1,3-galactosyltransferase 16 |
| trEMBL | tr|I1LVS2|I1LVS2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G01060.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00098 | 184674 | 185606 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT31 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000098s00007992.1 | PF01762.16 | Galactosyl_T | 74 | 221 | 1.40E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.235 |
| SRR1783600 | control | 0.158 |
| SRR1783602 | moderate drought stress | 0.093 |
| SRR1811619 | moderate drought stress | 0.081 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.308 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.048 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.764 |
| SRR2868004 | Drought Stress (root) | 3.758 |
| SRR2967015 | Control (root) | 2.306 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.071 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.046 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.221 |
| SRR9715743 | Root | 0.259 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 75.199 |
| SRR8749028 | MeJA induced 9h | 62.312 |
| SRR8749029 | MeJA induced 9h | 70.103 |
| SRR8749030 | Uninduced | 22.493 |
| SRR8749031 | Uninduced | 7.323 |
| SRR8749032 | Uninduced | 17.932 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.502 |
| SRR8400027 | Control - Root | 0.285 |