Gene detail information of Glyur000098s00007991 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G57510.1 | 2.00E-16 | |
| NR | XP_003610146.1 | 6.03E-64 | hypothetical protein MTR_4g128470 [Medicago truncatula] |
| trEMBL | tr|G7JD05|G7JD05_MEDTR | 2.00E-64 | DUF761 domain protein {ECO:0000313|EMBL:AES92343.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00098 | 179648 | 180049 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000098s00007991.1 | PF05553.6 | DUF761 | 91 | 124 | 3.10E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.487 |
| SRR1783600 | control | 0.462 |
| SRR1783602 | moderate drought stress | 0.985 |
| SRR1811619 | moderate drought stress | 0.826 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.736 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.097 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.673 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.749 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.822 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.820 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.586 |
| SRR2868004 | Drought Stress (root) | 19.836 |
| SRR2967015 | Control (root) | 30.184 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.117 |
| SRR9715740 | Leaf | 0.864 |
| SRR9715741 | Leaf | 1.889 |
| SRR9715739 | Root | 4.423 |
| SRR9715742 | Root | 5.502 |
| SRR9715743 | Root | 6.138 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 90.118 |
| SRR8749028 | MeJA induced 9h | 243.569 |
| SRR8749029 | MeJA induced 9h | 163.322 |
| SRR8749030 | Uninduced | 67.497 |
| SRR8749031 | Uninduced | 131.004 |
| SRR8749032 | Uninduced | 119.058 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.242 |
| SRR8400027 | Control - Root | 3.145 |