Gene detail information of Glyur000098s00007966 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G25770.1 | 4.00E-130 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_004507819.1 | 0 | PREDICTED: putative lipase C4A8.10-like [Cicer arietinum] |
| trEMBL | tr|G7JD33|G7JD33_MEDTR | 0 | Serine esterase family protein {ECO:0000313|EMBL:AES92371.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00098 | 26777 | 30786 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000098s00007966.1 | PF05057.9 | DUF676 | 45 | 276 | 3.50E-66 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.202 |
| SRR1783600 | control | 5.970 |
| SRR1783602 | moderate drought stress | 4.268 |
| SRR1811619 | moderate drought stress | 4.234 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.442 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.197 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.843 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.927 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.833 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.972 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.595 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.505 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.343 |
| SRR2868004 | Drought Stress (root) | 11.454 |
| SRR2967015 | Control (root) | 11.092 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.583 |
| SRR9715740 | Leaf | 3.764 |
| SRR9715741 | Leaf | 4.308 |
| SRR9715739 | Root | 3.132 |
| SRR9715742 | Root | 7.464 |
| SRR9715743 | Root | 5.594 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.855 |
| SRR8749028 | MeJA induced 9h | 7.750 |
| SRR8749029 | MeJA induced 9h | 6.814 |
| SRR8749030 | Uninduced | 3.972 |
| SRR8749031 | Uninduced | 2.026 |
| SRR8749032 | Uninduced | 2.461 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.207 |
| SRR8400027 | Control - Root | 9.694 |