Gene detail information of Glyur000097s00008316 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G24890.1 | 1.00E-24 | |
| NR | XP_003588654.1 | 5.92E-89 | hypothetical protein MTR_1g009640 [Medicago truncatula] |
| trEMBL | tr|G7I5R6|G7I5R6_MEDTR | 2.00E-89 | Uncharacterized protein {ECO:0000313|EMBL:AES58905.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00097 | 199559 | 200991 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 55.027 |
| SRR1783600 | control | 55.242 |
| SRR1783602 | moderate drought stress | 72.532 |
| SRR1811619 | moderate drought stress | 71.612 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 116.896 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 115.768 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 136.458 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 134.290 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 99.838 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 99.835 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 31.692 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 31.659 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 33.502 |
| SRR2868004 | Drought Stress (root) | 79.789 |
| SRR2967015 | Control (root) | 105.116 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 76.337 |
| SRR9715740 | Leaf | 84.950 |
| SRR9715741 | Leaf | 112.600 |
| SRR9715739 | Root | 82.554 |
| SRR9715742 | Root | 51.742 |
| SRR9715743 | Root | 56.418 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 188.030 |
| SRR8749028 | MeJA induced 9h | 267.556 |
| SRR8749029 | MeJA induced 9h | 243.276 |
| SRR8749030 | Uninduced | 97.451 |
| SRR8749031 | Uninduced | 450.184 |
| SRR8749032 | Uninduced | 266.474 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 57.982 |
| SRR8400027 | Control - Root | 46.170 |