Gene detail

Gene detail information of Glyur000097s00008300

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G31390.1	0	Protein kinase superfamily protein
NR	XP_004498586.1	0	PREDICTED: uncharacterized aarF domain-containing protein kinase At4g31390, chloroplastic-like [Cicer arietinum]
COG	YP_007129393.1	7.00E-179	ABC-1 domain-containing protein [Gloeocapsa sp. PCC 7428]
Swissprot	tr\|Q8RWG1\|Y4139_ARATH	0	Uncharacterized aarF domain-containing protein kinase At4g31390, chloroplastic (Precursor)
trEMBL	tr\|I1M9R6\|I1M9R6_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA14G17300.1}

Sequence

Transcript Sequence

>Glyur000097s00008300.1
CTCACTTTCCCGTTTAAATGAAAAACAACCAATTTTTGAAGCAGTGGTGGTTGGTTATTCAGTTATTTGATCTCAGAACTTCTGATTTTCAGTAGCAAAAGAAAAAAAAAAATGCCNCCAATTCCTTCTTCAATTTAGGGTTCCCACCCTTCCTAGTTCCGAGCTCAATTCCTTACACGACCAAGCAACCATGGAGTCTTTCTACGCGAACTCCTTATACGTTGTTCCTACTCTGTCGCCGCGAACCTCGATTCCTTCTTCTTCAAAGTCGTTTCAACGNAAGAAGGCATGGCGAGCGCGGATTTCGAGTTCATCTGCGACGACGGGAAGTTCGGTCCAAAACGGCGCCGTTTTGAGGGCGTTGCAGCTGCCGAAGAACTCCAACAACAACAGTGCGCTGGAGCAGCTCGATATCGAGCGTGGCGTCTGCATCCCTTTCCGCAAGTACTCCCCCGAGAGTGTGAGGAACAATGTATTAGAATCAAGAGGAGCTATTTTGTCACTAATGTTGCGGGGAGTGGAGATTGTTTGGAGCCTGGGCTTTTACTGGGGTACCTTGATGTATGATTTCCTAGTTGGAAGGGATGAAGAGGTTGTTCCATATCGTGCTCGACAGCTAAGGAACCTGTTGTGTGATCTGGGGCCTTCATTTATTAAAGCTGGTCAGGTCCTTGCAAACAGGCCAGATATAATTAGAGAAGATTATATGAATGAACTTTGCATTCTTCAAGATGACGTTCCTCCATTTCCCAATCAAATTGCCTTCAATATCATAGAGGAGGAACTGGGCCAGCCCCTTGAAGCTGTTTTCAACAGAATCTCATCAGAGACAATAGCAGCTGCAAGTTTAGGTCAAGTTTACCGGGCTACTTTACGTGCCACTGGCGAGGAAGTTGCTATCAAGGTTCAAAGGCCCGGGATAGAGCCCATAATATATCGAGATCTTTTCCTATTTCGTACTTTGGCTTCATTCTTAAATGGCATTAGTATACAGAAACTTGGGTGTAATGCTGAGCTGATTGTTGATGAGTTCGGTGAAAAGCTTTTGGAAGAGCTTGATTATACCCTGGAAGCGCGCAATATTGAAGATTTTCTTGAAAATTTTAAAGATGACCCCACTGTCAAAATTCCTCGGGCTTACAAACAACTTTGTGGTCCACGTGTATTAGTAATGGAATGGATTGATGGTATTAGGTGCACCAATCCACAGGCCATCAAAGAAGGTGGTATCGATGTAGATGGATTTCTAACAATTGGTGTGAGTGCCGCCCTTCGACAACTGTTGGAATTTGGATTATTTCATGGAGACCCTCACCCTGGAAATATTTTTGCCATGCGTGATGGACGAATTGCATATGTGGACTTTGGCAATGTTGCTGTTCTTAGTCAGCAAAATAAACAGATTTTAATTGATGCTGTTGTCCACGCTGTGAATGAGGACTATGCTGAGATGGCTAATGATTTCACCAGATTAGGCTTCCTGTCACCAGGGACCGATGTCACTCCAATAATTCCTGCTTTAGAAGCAATTTGGCAGAACTCTGCTGGAAAAGGACTGTCAGATTTTAATTTTCGTAGTGTCACTGGGAAGTTTAACCAGCTAGTTTACAATTATCCCATTCGAATCCCAGAAAGGTTTTCACTTGTAATTCGTTCTTTATTGACTCAAGAAGGAATCTGTTTTACTCTGAAGCCCGACTTCAAATTTCTCGAGGTTGCGTATCCATATGTGGCAAAGCGACTATTAACAGATCCAAATCCAGCTCTACGTGAACGACTCATACAGGTTCTATTCAAAGATGGTCTTTTCCAGTGGAAACGGCTTGAAAACCTTATTGTTCTTGCAAAGGAAAATGTGGCCAAGATGAGCAGCAATCCAGCATTGCAAGTGAAAAACACGCAAAGCCAGAGAGACTGGAAATTTGAAAGAAAATTGGACCTCACAGACACAATCAAAGACGGAGCTCGCCTTTTCTTTGTCGATGAAGGAATACGTAGACAGCTTCTTCTTGCTTTGACTGAGGATTCGAAGCTTCATATTGAAGAGCTTGTCGATGTGTATAGGTTGGTTGAAGATCAGATAGACATACCCACCGTGGCTACAGAAGTAGCTCGAGACTTTCCAACGGTTATCAGGGATCTCCTTCTTTCGTGGAGTGAAAACGTCTTATCCGATAGATAGCTAAATTTTTGGACGGTGCATAGCAAATACAGATATTGTTCCAGTCAGAGATGAGTATACTTTATACATGTCCTATATTTTCTCTTTATTCCCTTCTGTTGCAGAAGGTTTATTATATGTAGTTTTAAATGACTGTCAACACTTTAAAGGAAATAGTACTACATTTTGTATAGGAAACGTTATTTTGCTCAGTAAATATCAAGTTGAAGTTTCATTGGGAAATGTCCAAGAAAATCTTATAAATAAATCCTTGAGCTTCCTTCAGCATAACTCATTCAGTTCTTCAAACTTCTGTTGCTGCTTGATAGGTCACACGTCTGTATTTGTAGAATTGCAAATAAATTCCTTTAGTTGATCTTATGTATCACGTCACTACGGTTTATATGTGAAAAACTGAAAACCTACGTGACTATTAATGTGTGTATAATTCTGTTATTTACTAATATCTCCCC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00097	107473	114735	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000097s00008300.1	PF03109.11	ABC1	197	317	2.10E-32
Glyur000097s00008300.2	PF03109.11	ABC1	142	262	1.80E-32

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	6.281
SRR1783600	control	6.240
SRR1783602	moderate drought stress	6.507
SRR1811619	moderate drought stress	6.398

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	6.616
DRR006520	Root Summer glycyrrhizin high producing strain	6.470
DRR006521	Root Winter glycyrrhizin high producing strain	19.270
DRR006522	Root Winter glycyrrhizin high producing strain	18.916
DRR006523	Root Summer glycyrrhizin low producing strain	6.798
DRR006524	Root Summer glycyrrhizin low producing strain	6.761
DRR006525	Leaf Summer glycyrrhizin high producing strain	62.278
DRR006526	Leaf Summer glycyrrhizin high producing strain	62.129

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	13.884
SRR2868004	Drought Stress (root)	18.034
SRR2967015	Control (root)	15.606

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	88.395
SRR9715740	Leaf	123.655
SRR9715741	Leaf	101.734
SRR9715739	Root	4.720
SRR9715742	Root	7.157
SRR9715743	Root	5.863

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	7.248
SRR8749028	MeJA induced 9h	8.271
SRR8749029	MeJA induced 9h	3.899
SRR8749030	Uninduced	6.290
SRR8749031	Uninduced	4.691
SRR8749032	Uninduced	4.015

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	14.873
SRR8400027	Control - Root	12.786