Gene detail

Gene detail information of Glyur000097s00008295

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G22710.1	8.00E-169	sucrose-proton symporter 2
NR	XP_004496382.1	0	PREDICTED: sucrose transport protein-like [Cicer arietinum]
COG	YP_001302933.1	1.00E-22	transporter [Parabacteroides distasonis ATCC 8503]
Swissprot	tr\|Q39231\|SUC2_ARATH	0	Sucrose transport protein SUC2
trEMBL	tr\|I1LD90\|I1LD90_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA10G36200.1}

Sequence

Transcript Sequence

>Glyur000097s00008295.1
CACACACACACACAGGGAACTGTTTCTAAAAGTCATATAATATGAGATTCTCCATTACATGCAACTTCCCCCCTCTCCCCCCATTATAAAACCCACCCCTCGCCCTCCCCACAAAACACAAAACGCAAACTCAAACACTATACAAACCACCACCATGGATCACTCCTCTCTCTCTGCCACCAAACAAAACAACAACAACACCACCAACACCAAGCCCTCTTCTCTCCATGTGGANGCCCCTCCTCCTGAGCCCAGCCCTCTCCGGAAGATCATCGTGGTGGCNTCCATCGCCGCCGGGGTGCAATTCGGGTGGGCCCTACAGCTCTCCCTTTTAACCCCTTACGTCCAGTTGCTGGGAATCCCCCACACTTGGGCCGCCTTCATCTGGCTCTGCGGCCCAATCTCCGGCATGCTGGTCCAGCCCATCGTCGGCTACCACAGCGACCGATGCACCTCCCGCTTCGGTCGCCGCCGTCCCTTCATNGCCGCCGGCTCCGTCGCCGTCGCCATCGCCGTCTTTTTAATCGGCTACGCCGCCGACTTCGGACACATGTTCGGCGACGACCTCGCCAAGAAGACCCGCCCCCGCGCCATCGCCATCTTCGTCGTCGGATTCTGGATCCTNGACGTCGCCAACAACATGCTCCAGGGTCCCTGCCGCGCCCTCCTCGCCGACCTCTCCGCCGGCAACCACCGGAAAACTAGGACCGCCAACGCCGCGTTCTCCTTCTTCATGGCCGTCGGAAACGTCCTCGGCTACGCCGCCGGGTCCTACAACGGCCTCTACCACGTGTTCCCCTTCACGAAGACGAAGGCATGCGACGTCTACTGCGCGAACCTGAAGAGCTGCTTCTTCCTCTCCATTGCGCTCCTCATGACGCTGGCCACCGCCGCACTGATCTACGTGAAGGAGACGACGATTCCGTCCCAGAAAAGCGTCGGTGGTGACGCGGAGGAGGACGGTGCGGGTTCGGGTGGAGGCATGCCGTGTTTTGGGCAGTTATTCGGTGCTTTTCGGGAACTGAAGAGGCCCATGTGGATCCTACTTTTGGTGACGTGTCTCAACTGGATTGCGTGGTTCCCTTTCTTGTTGTTTGACACTGACTGGATGGGGCGTGAGGTGTATGGGGGAACGGTTGGGGAAGGTAGGGCCTATGATATGGGCGTGCGCNCGGGTGCGTTGGGACTCATGCTTAACTCTGTGGTTCTTGGTGCTACGTCGTTGGGGGTTGAGGTTTTGGCGCGTGGCCTTGGGGGCGTTAAGAGNTTGTGGGGAATCGTCAACTTCTTGCTCGCCATTTGTTTGGCCATGACCGTTTTGGTCACCAAGTTGGCCGAAAATTCACGACAATACACCGTCCTTCCCGGCGGTCACCGGGAACCTCTTCCTCCTTCCGGCGGCATCAAGGCCGGCGCGTTGGCCCTCTTCTCCGTCCTCGGAATCCCTCTTGCGATTACTTACAGCGTACCCTTTGCCATGGCATCTATATTCTCCAGCACCTCAGGGGCAGGCCAGGGGTTATCTCTTGGAGTTCTCAATCTTGCAATTGTCATACCACAGATGGTGGTGTCTGTGATAAGTGGACCATGGGATGCTCTGTTTGGAGGTGGTAACTTGCCGGCGTTCGTGGCGGGTGCTGTGGCGGCGGCAGCCAGTGGCATATTATCCATAATCTTACTGCCATCTCCACCGCCAGATTTGGTCAAGTCTGTAAACGTTGCCGGAGGCTTTCATTAATCAGTGGAACATTTTTATCTCTTTTTTTTGTCCCCGTGTTTGATATGGAAAAATGAGAATGTCTTTTCTTTCTTTTCTTTTTATTTGAAGCCGTTGTGTATAAGGCTTTTTAGATCTCAACAAAATGCTAGAATTGCCATTTTTGTGGCATCAATGACTAATAACAGTCATTTTTAATTGTAAAGTTTGATGTGGCTGTACACAACCCTGTTCAAGCAGGACCCAGCCCTCCCTTTATTTATGTGATCTTTGTGACATTTTGGGTGCTCAGAGGAATGTAGCGATGGAGAAAGCATGCATGGACGGTTAATCCATTAATAATACTTATGGGAGAAAGTTCTGAATTGGACTGGACTACTTAATTCCCTATTTCCCCCACTCCCTTTCCATTGTCTTCTTCTATAGTTATTACCAGTACGATCTCTTTTAATTCCATCATAGAGAGAAAACGAAGGCTTGTGTTTATTTGTCATTACTCATTACTACTATGTTATGGCTATGAAGTTGTNCACA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00097	50436	54019	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0015770 sucrose transport

cellular_component
GO:0005887 integral component of plasma membrane

molecular_function
GO:0008515 sucrose transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000097s00008295.1	PF13347.1	MFS_2	85	279	1.30E-08

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	53.549
SRR1783600	control	53.843
SRR1783602	moderate drought stress	81.666
SRR1811619	moderate drought stress	81.066

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	44.073
DRR006520	Root Summer glycyrrhizin high producing strain	43.629
DRR006521	Root Winter glycyrrhizin high producing strain	84.533
DRR006522	Root Winter glycyrrhizin high producing strain	82.613
DRR006523	Root Summer glycyrrhizin low producing strain	108.111
DRR006524	Root Summer glycyrrhizin low producing strain	108.088
DRR006525	Leaf Summer glycyrrhizin high producing strain	223.378
DRR006526	Leaf Summer glycyrrhizin high producing strain	221.266

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	38.630
SRR2868004	Drought Stress (root)	101.852
SRR2967015	Control (root)	176.366

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	350.654
SRR9715740	Leaf	216.237
SRR9715741	Leaf	268.293
SRR9715739	Root	153.989
SRR9715742	Root	280.143
SRR9715743	Root	237.970

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	13.024
SRR8749028	MeJA induced 9h	3.003
SRR8749029	MeJA induced 9h	4.667
SRR8749030	Uninduced	0.295
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.869

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	69.289
SRR8400027	Control - Root	106.211