Gene detail information of Glyur000097s00008286 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G71970.1 | 3.00E-16 | |
| NR | AFK40047.1 | 5.06E-81 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SIF5|I3SIF5_LOTJA | 2.00E-81 | Uncharacterized protein {ECO:0000313|EMBL:AFK40047.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00097 | 12063 | 13678 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.227 |
| SRR1783600 | control | 2.850 |
| SRR1783602 | moderate drought stress | 2.529 |
| SRR1811619 | moderate drought stress | 2.309 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.857 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.417 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.028 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.695 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.515 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.015 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.400 |
| SRR2868004 | Drought Stress (root) | 3.501 |
| SRR2967015 | Control (root) | 3.981 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.384 |
| SRR9715740 | Leaf | 1.856 |
| SRR9715741 | Leaf | 1.979 |
| SRR9715739 | Root | 2.846 |
| SRR9715742 | Root | 1.988 |
| SRR9715743 | Root | 1.308 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.048 |
| SRR8749030 | Uninduced | 0.059 |
| SRR8749031 | Uninduced | 0.706 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.330 |
| SRR8400027 | Control - Root | 6.167 |