Gene detail

Gene detail information of Glyur000096s00005962.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G66390.1	3.00E-137	Peroxidase superfamily protein
NR	XP_004509315.1	0	PREDICTED: peroxidase 72-like [Cicer arietinum]
Swissprot	tr\|Q9FJZ9\|PER72_ARATH	0	Peroxidase 72 (Precursor)
trEMBL	tr\|G7LDV0\|G7LDV0_MEDTR	0	Peroxidase family protein {ECO:0000313\|EMBL:AET03865.1}

Sequence

Transcript Sequence

>Glyur000096s00005962.1
CTTTGAGAGCTTCTCTCCTTCAACTACTCTTTTCATATTTCTTGTCCTTTGAAGTGATATTGAAAGAAACAACAACAATGGCCAATTCTATGAGCTTTCTAATGCTTCTTTCTTTACTAGCCTTTGCTCCCTTCTGCCTCTGTCACAAGAAAATGGGGTCTTATCTCTACCCTCAATTTTATGACTATTCATGCCCACAAGCTCAAGAGATTGTCAAGTCCATCCTTGCCAAGCATGTTGCAAAGGAACCCCGTATAGCTGCTTCACTTTTGAGACTTCATTTCCATGACTGTTTTGTCAAGGGTTGTGATGCTTCATTGTTGTTAGATAGCAGTGGAAACATTATCAGTGAGAAGGGGTCAAATCCCAACCGCAATTCAGCTCGAGGATTTGAAGTCATTGATGAAATTAAATCCACACTAGAGAAAGAATGCCCTCACACAGTGTCTTGTGCTGACATTCTGGCTCTAGCTGCCAGAGATTCAACTGTTCTTACTGGTGGACCAAGCTGGGAAGTTCCTGTAGGCAGAAGGGACTCTCTAGGTGCAAGCTTAAGCGGCTCCAACAACAACATTCCTGCCCCAAACAACACATTCCAGACCATCCTCACTAAATTCAAGCTTCAAGGACTTGACATTGTTGATCTTGTTGCTCTATCTGGGAGCCACACCATAGGAAACTCAAGGTGCACCAGCTTCAGGCAAAGACTCTACAACCAAATTGGGAATGGCAAGGCAGATTTCACTCTTCACCAATACTATGCTGCTGAATTGCGCAGTGGATGTCCAAGATCTGGGGGTGACCAGAACCTGTTCTTCCTAGACCCTGTCACCCCAACAGAGTTTGACAATACCTACTTCAAGAACCTGTTGGCTTACAAGGGTCTGTTGAACTCTGATGAAGTTCTCTTGACAATGAATCAGGAATCAGCACAACTGGTGAAGCTGTATGCTGAGAGAAACGACCTTTTCTTTGAACAATTCGCCAAGTCAATGGTCAAGATGGGGAACATATCTCCTTTGACAAGATCAAGGGGACAGATCAGAACAAACTGCCGCATGATTAACACTTGGTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00096	310818	312752	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00430	E1.11.1.7	EC:1.11.1.7	Phenylpropanoid biosynthesis	map00940

Gene Ontology

biological_process

GO:0006979 response to oxidative stress

GO:0055114 oxidation-reduction process

molecular_function

GO:0004601 peroxidase activity

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000096s00005962.1	PF00141.18	peroxidase	47	293	1.40E-71

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	7.964
SRR1783600	control	8.073
SRR1783602	moderate drought stress	10.110
SRR1811619	moderate drought stress	10.184

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	5.285
DRR006520	Root Summer glycyrrhizin high producing strain	5.387
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	17.979
DRR006524	Root Summer glycyrrhizin low producing strain	17.940
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.583
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.662

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	119.798
SRR2868004	Drought Stress (root)	91.595
SRR2967015	Control (root)	108.448

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.062
SRR9715740	Leaf	0.000
SRR9715741	Leaf	0.000
SRR9715739	Root	16.576
SRR9715742	Root	2.541
SRR9715743	Root	5.385

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.258
SRR8749028	MeJA induced 9h	1.032
SRR8749029	MeJA induced 9h	0.053
SRR8749030	Uninduced	10.729
SRR8749031	Uninduced	21.448
SRR8749032	Uninduced	2.949

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	23.536
SRR8400027	Control - Root	18.885