Gene detail information of Glyur000096s00005959 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G26750.1 | 1.00E-94 | |
| NR | XP_004509312.1 | 0 | PREDICTED: uncharacterized protein LOC101505599 [Cicer arietinum] |
| trEMBL | tr|I1JCL8|I1JCL8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G05960.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00096 | 297206 | 300306 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000096s00005959.1 | PF09814.4 | HECT_2 | 359 | 551 | 1.10E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.492 |
| SRR1783600 | control | 11.355 |
| SRR1783602 | moderate drought stress | 13.408 |
| SRR1811619 | moderate drought stress | 13.196 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.237 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.627 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.245 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.310 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.165 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.539 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.216 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.079 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.207 |
| SRR2868004 | Drought Stress (root) | 8.463 |
| SRR2967015 | Control (root) | 10.895 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.554 |
| SRR9715740 | Leaf | 15.082 |
| SRR9715741 | Leaf | 9.186 |
| SRR9715739 | Root | 9.044 |
| SRR9715742 | Root | 6.378 |
| SRR9715743 | Root | 8.454 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 34.624 |
| SRR8749028 | MeJA induced 9h | 17.197 |
| SRR8749029 | MeJA induced 9h | 19.740 |
| SRR8749030 | Uninduced | 3.745 |
| SRR8749031 | Uninduced | 2.396 |
| SRR8749032 | Uninduced | 5.613 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.868 |
| SRR8400027 | Control - Root | 13.167 |