Gene detail

Gene detail information of Glyur000096s00005952.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G19630.1	5.00E-103	cytochrome P450, family 722, subfamily A, polypeptide 1
NR	AET03877.2	0	cytochrome P450 family protein [Medicago truncatula]
COG	YP_007055574.1	4.00E-53	cytochrome P450 [Rivularia sp. PCC 7116]
Swissprot	tr\|Q05JG2\|ABAH1_ORYSJ	1.00E-61	Abscisic acid 8'-hydroxylase 1
trEMBL	tr\|G7LDW2\|G7LDW2_MEDTR	0	Cytochrome P450 family protein {ECO:0000313\|EMBL:AET03877.2}

Sequence

Transcript Sequence

>Glyur000096s00005952.1
CTGTCGTCATGCCCTTTTTATATAACAATATAAGCGTTACCTAGCTGAACCATATATACTCACGATTAGTACTTGACTTTCCTTCATTGCCATTGTTTTGAGAAAGAGCAGCAACAAAAACAAGAGATGTTGAACCTATCGAGGGAAGAGCTAGTATTCGTAGTGAAGAACTATTATGACATAATTGTGGTCTCATTTCTCTCTATAGGATTAACATATTTCGCTTCAAAAGCTTGGAAAAGAGCTAGAAACAAGAGCGAAGATATCCCTGGCCGGCTGGGATTACCTTTTATTGGGGAAACTTTTTCTTTACTTTCAGCCACTAATAGTACAAGAGGATGCTATGATTTTGTCAGACTTAGGCGATTGCATGGGAGATGGTTCAAGACAAGGCTATTCGGCAAGATCCACATATTTGTTCCTAATCCTGAAGGTGCAAGGACGATATTTGCTAATGACTTTGTTCTATTCAACAAGGGTTACGTAAAATCAATGGCAGATGCCGTGGGAAAGAAAAGCTTATTATGTGTACCCGTTGAGAGCCACAAAAGAATAAGGCGCCTTCTATCTGAACCATTCTCCATGACTTCCCTATCTGCATTTGTCACAAAATTTGACAAAATGTTGTGTGGAAGGTTGCAAAAGCTAGAAGCAAGCGGGAAAAGTTTCAAGGTGTTGGACTTCTGCATGAAGATGACATTTGATGCAATGTGTGATATGCTGCTGAGCATCACGGAGGATTCATTACTACGGCAGATAGAGAAAGACTGTATTGCTGTCTCTGATGCCATGTTGTCCTTTCCTGTCATGATTCCTGGGACCAGATACTATAAAGGCATCATGGCTCGTAAAAGGCTCATGGAAACCTTCAGAGAGATCATTGCTAGACGTAGGAGGGGAGAAGAGTCTCCAGGGGACTTCCTGCAGTCCATGTTGCAGAGAGACTCAATCCCAGCCAGTGAAAAGCTTGATGACTCGGAGATTATGGATAATCTGTTGACATTGATAATTGCTGGACAGACCACTACAGCAGCAGCAATGATGTGGAGTGTAAAGTTTCTACATGACAACAGAGATGCACAGGACATGCTCAGGGTGAGAGACACTGCACAGATTCTAGAGGAACAATTGTCTTTAAACAAAATGAAGCCAGAAGGGACTTCACTTAATCAAGAAGACATCAACAACATGCGTTATGGTTTGAAGGTAGTTAAGGAAACACTGAGAATGTCTAATGTCCTATTATGGTTTCCACGTGTTGCCCTTCATGACTGCACAATTGAAGGGTATGAAATAAAGAAAGGTTGGCACATTAACATCGATGCAACTTGTGTACATTACGACCCAGATCTGTACAACGATCCGTTGAAATTTAACCCGCAAAGATTTGATGAAATGCAAAAGCCCTACAGTTTCATACCTTTTGGATCAGGGCCTAGGACATGCCTTGGGATGAATATGGGGAAAGTGACAATGTTGGTCTTTTTACACAGACTCACTAGTTGTTACACGTGGACCCTTGATGATTTAGACACTTGCTTAGAAAAGAAGGCACACATACCTAGACTAAGGAGTGGCTGTCCTATAACGTTGAAGTCCTTAAGCAAAAGCATGTCAGAGGCATAAACGGGGATAATTGAGATTTACAAGACACCTACTTCACCGTGTGAAGGCCTAAGAACAATGCAGCAGACAGTTGTGCATATCTGCAGACTTACGAGAGATTTGAAGCAAATAGCATCACAGGAAATAAATCTGTGCAAGAATTAATCATGTGTGATCAAATCACTACCCTACTTTCAGGAATTAATAATCCTAATCTATGGCTTGTATACTATATATAAATTGAGTTACGAATTAAATTACAAGTTAACCTGGTGGTGGATGATGATGAGTTCTGTTAAAACTTGGGGGTAAATCACCACAAGAATAACCAGCAGCTTGTTGGAACAGTGTGCGCGCGGAGAGAAACTGCGCATCATGTGTTTTAAATATACGGTTTGAATAAATCAATCACATTACATGATACATAGATGGAGGGTAAGGGCTTCTTGTGTCTGAACATACGGATTAACCTACACATTAAAACTCATACACAATACCCAGTACAACAATCCATACAGAATAGAGTACTCATGACGAAGCTGAATAACATAAATGATCACTATTTGGGATAAACTGATATAATCCAAATATTTTTGACATCTAACAAATCTGAGTTTCTTTAAAGTGATTATTCTAATCGACAAATAATCTATCAACTTGCATTAGTATGTTTTATGTTTGCACTCAAGAGGATCATAATATATGTATGTTACATTGCGTTTGCTTCATTACTTCCCAAATTTGTATCATTAAATCCTAGATTCTTCACAAATTTGGTAGGTATCAAGCAATGACATAAGCAGCCACTATTAGCAATGTAGCATGCAGAACACTGGCATGATCAAAGTACAAATATATTGAACCTCAATGAATAGAAATTGACTTGTATTGTTTGACTGTATTTGTGATAGCCTGTTCCACTGGTAGTCTTTCCATACTTGAAGCCCCATAAAATCCATGAACTCCCTTGGTTCTCTTTAATATAAATTCTGCCTCTTGTGGACCAGAAATCGGACCTGCATATTCCATACATTATTCTGAACTAAGACTAAAAGTTGACAACTGGCTAGTGAACACTAAATTTACTATTTAATCTATCAAAATACACAAACAAAAAGGCTTCCAGGTGATGTGCATACCTCCATGGCACAGCACAATGACATTGGGATTGATACTATGTGCTGCATCTGCAATAGCTTGTACACGAACTACACTTTCCTCAAGTGAAACAGCTGTTTTTGCACCTATGGAGCCTGTTGTAGTTAGGCCCATATGGGCCACTATAATATCAGCGCCAACTTTAGCCATTTCAATAGCTTCATTTTGATTGAATGCATATGGGGTTGTCAAGAGACCCATTTTATGGGCTTTTTGGATCATCTCAACTTCCAAGCTGTTCATTTAATATGAAAATGAATCAAAGTTGNAACTTGTAAGAGGTGTAACAGTCCAACTTATGTGATATATTGAGAAATTCTTTTCATAACACCTACCTGTATCCCATTCCCGTTTCTTCAAGATTTTGTCTAAAATTACCATCAAATAACCCAACAGTTGGAAAATTTTGTACCCCAGAGAATCCAGTAGACTCCACCTGTTTAAGGAAGTAATCCATTTTACGGAAAGGATCAGTTGCACATACACCGGCAAGAACCGGTACCTTCTTTACCACCTGAAAACCAAAGTTCAGCATGTCAGTTAGACAGAATGAGAGATAGAGAGATTCATTGCTAGCTTGACAAGGGGATCTTATTATCACATAAATTATCCAGTTTATTACCCAAGATAGGTATTGAAGGTTAATAATTTATTATAGCTAGCTGCACCTGAC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00096	268508	273773	-

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP722A1
Cytochrome P450 Family	CYP718

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000096s00005952.1	PF00067.17	p450	51	469	5.60E-62

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.868
SRR1783600	control	0.841
SRR1783602	moderate drought stress	0.593
SRR1811619	moderate drought stress	0.697

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.179
DRR006520	Root Summer glycyrrhizin high producing strain	1.258
DRR006521	Root Winter glycyrrhizin high producing strain	0.538
DRR006522	Root Winter glycyrrhizin high producing strain	0.602
DRR006523	Root Summer glycyrrhizin low producing strain	1.154
DRR006524	Root Summer glycyrrhizin low producing strain	1.237
DRR006525	Leaf Summer glycyrrhizin high producing strain	23.008
DRR006526	Leaf Summer glycyrrhizin high producing strain	22.751

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	38.723
SRR2868004	Drought Stress (root)	26.959
SRR2967015	Control (root)	19.176

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	4.934
SRR9715740	Leaf	10.576
SRR9715741	Leaf	12.350
SRR9715739	Root	0.353
SRR9715742	Root	0.697
SRR9715743	Root	0.760

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.526
SRR8749028	MeJA induced 9h	0.233
SRR8749029	MeJA induced 9h	0.215
SRR8749030	Uninduced	0.037
SRR8749031	Uninduced	0.052
SRR8749032	Uninduced	0.111

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	8.882
SRR8400027	Control - Root	4.547