Gene detail information of Glyur000096s00005950.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G11480.1 | 4.00E-51 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| NR | KHN22766.1 | 4.24E-151 | Salicylate O-methyltransferase [Glycine soja] |
| COG | NP_924885.1 | 1.00E-13 | cyclopropane-fatty-acyl-phospholipid synthase [Gloeobacter violaceus PCC 7421] |
| Swissprot | tr|Q9SPV4|SAMT_CLABR | 3.00E-98 | Salicylate carboxymethyltransferase |
| trEMBL | tr|I1MNB4|I1MNB4_SOYBN | 3.00E-149 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G24800.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00096 | 261971 | 263763 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K08241 | E2.1.1.141 | EC:2.1.1.141 | alpha-Linolenic acid metabolism | map00592 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000096s00005950.1 | PF03492.10 | Methyltransf_7 | 52 | 182 | 7.10E-56 |
| Glyur000096s00005950.1 | PF03492.10 | Methyltransf_7 | 183 | 277 | 6.70E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.067 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.357 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.438 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.001 |
| SRR2967015 | Control (root) | 0.023 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.010 |
| SRR9715740 | Leaf | 6.530 |
| SRR9715741 | Leaf | 8.579 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.064 |
| SRR8749028 | MeJA induced 9h | 0.044 |
| SRR8749029 | MeJA induced 9h | 0.047 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.034 |
| SRR8400027 | Control - Root | 0.000 |