Gene detail information of Glyur000096s00005941 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G66440.1 | 1.00E-14 | |
| NR | KEH20411.1 | 1.27E-85 | transmembrane protein, putative [Medicago truncatula] |
| trEMBL | tr|A0A072TTD0|A0A072TTD0_MEDTR | 5.00E-86 | Transmembrane protein, putative {ECO:0000313|EMBL:KEH20411.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00096 | 233810 | 234472 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.339 |
| SRR1783600 | control | 2.458 |
| SRR1783602 | moderate drought stress | 2.640 |
| SRR1811619 | moderate drought stress | 2.628 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.108 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.444 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.680 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.484 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.105 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.341 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.477 |
| SRR2868004 | Drought Stress (root) | 9.678 |
| SRR2967015 | Control (root) | 9.792 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.877 |
| SRR9715740 | Leaf | 2.870 |
| SRR9715741 | Leaf | 6.037 |
| SRR9715739 | Root | 2.510 |
| SRR9715742 | Root | 11.379 |
| SRR9715743 | Root | 7.249 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.438 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.061 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.934 |
| SRR8400027 | Control - Root | 2.705 |