Gene detail information of Glyur000096s00005936 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G18210.1 | 3.00E-18 | |
| NR | KEH20421.1 | 2.97E-64 | hypothetical protein MTR_8g077145 [Medicago truncatula] |
| trEMBL | tr|A0A072TTD9|A0A072TTD9_MEDTR | 1.00E-64 | Uncharacterized protein {ECO:0000313|EMBL:KEH20421.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00096 | 193915 | 194289 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.140 |
| SRR1783600 | control | 0.842 |
| SRR1783602 | moderate drought stress | 0.297 |
| SRR1811619 | moderate drought stress | 0.505 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.416 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.436 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.293 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.403 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.240 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.236 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 48.532 |
| SRR2868004 | Drought Stress (root) | 248.988 |
| SRR2967015 | Control (root) | 168.074 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 179.944 |
| SRR9715740 | Leaf | 76.085 |
| SRR9715741 | Leaf | 259.784 |
| SRR9715739 | Root | 26.057 |
| SRR9715742 | Root | 147.295 |
| SRR9715743 | Root | 107.010 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.654 |
| SRR8749028 | MeJA induced 9h | 3.151 |
| SRR8749029 | MeJA induced 9h | 2.565 |
| SRR8749030 | Uninduced | 170.033 |
| SRR8749031 | Uninduced | 72.566 |
| SRR8749032 | Uninduced | 35.525 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 62.749 |
| SRR8400027 | Control - Root | 121.910 |