Gene detail information of Glyur000096s00005934 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G36520.1 | 6.00E-71 | Chaperone DnaJ-domain superfamily protein |
| NR | XP_004509282.1 | 0 | PREDICTED: LOW QUALITY PROTEIN: axoneme-associated protein mst101(2)-like [Cicer arietinum] |
| Swissprot | tr|Q9FWS1|AUL1_ARATH | 5.00E-83 | Auxilin-like protein 1 |
| trEMBL | tr|A0A072TUD5|A0A072TUD5_MEDTR | 0 | Chaperone DnaJ-domain protein, putative {ECO:0000313|EMBL:KEH20423.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00096 | 184605 | 191322 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000096s00005934.1 | PF00226.26 | DnaJ | 1430 | 1480 | 5.00E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.076 |
| SRR1783600 | control | 7.079 |
| SRR1783602 | moderate drought stress | 12.805 |
| SRR1811619 | moderate drought stress | 12.624 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.405 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.401 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.341 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.378 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.699 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.713 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.688 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.795 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.761 |
| SRR2868004 | Drought Stress (root) | 9.820 |
| SRR2967015 | Control (root) | 10.236 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.693 |
| SRR9715740 | Leaf | 4.197 |
| SRR9715741 | Leaf | 6.003 |
| SRR9715739 | Root | 0.558 |
| SRR9715742 | Root | 2.622 |
| SRR9715743 | Root | 2.192 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.768 |
| SRR8749028 | MeJA induced 9h | 5.438 |
| SRR8749029 | MeJA induced 9h | 7.516 |
| SRR8749030 | Uninduced | 1.708 |
| SRR8749031 | Uninduced | 2.455 |
| SRR8749032 | Uninduced | 1.825 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.355 |
| SRR8400027 | Control - Root | 12.939 |