Gene detail

Gene detail information of Glyur000096s00005917

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G64700.1	5.00E-83	nodulin MtN21 /EamA-like transporter family protein
NR	NP_001241386.1	0	uncharacterized protein LOC100804562 [Glycine max]
Swissprot	tr\|Q9FGG3\|WTR45_ARATH	4.00E-128	WAT1-related protein At5g64700
trEMBL	tr\|C6T8H7\|C6T8H7_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA06G15460.1}

Sequence

Transcript Sequence

>Glyur000096s00005917.1
ATGAAAGGGAAAAAGCCCTATGTGGTTGTGTTTATCATACAAGCCATATACGCTGGTATGTTCCTACTCTCAAAAGCTGCATTCGACCACGGCATGAACAATTTCATCTTTGTCTTCTACAGACAGGCAGTAGCAACCCTTTTCCTCATCCCTTTCGCTTTCTTCTTCGAAAGGAAACTTGCACCTCCTCTGTCCTTCAGGACCTTCTGCAAGATTTTCTTCCTTTCTTTCTTCGGGATTACTTTGAGCTTGGATGTATATGGTGTTGGTCTTATTTACACCTCTGCAACTTTGGCTGCTGCTACCACGAACTGTCTTCCTGTCATCACCTTCTTCTTAGCGCTCCTACTCAGGATTGAGAGTTTGAAGATAAAGACGACAGCTGGGATTGCTAAATTGGTAGGCGTTGTGGCATGCNTGGCTGGTGCAGCGACCCTTGCCTTTTATAAAGGTCCTCATTTGAAACTTTTAAGCCATCATGTTCATCCCCTTCTGGGATACCATAAAAGCGAACAACATCAAGCTGNTGATCATGCTGCATCTGGCACATGGATAAAAGGTTGCTTCCTCGTGCTGCTCTCCAACATATGTTGGGGGCTGTGGCTGGTGCTACAGGCTTTTGTCATAGAATGCTACCCTTCAAAGGTGCTCTTCACAGCTCTCCAGTGTTTCTTAAGCTCAATTCAGTCTTTAGTTGTTGCCTTGGCCGTAGAAAGGGACATTGAGCAATGGAAGTTGGGTTGGAATGTTAGGCTCCTCGCCGTAGGATACGGTGGAATAATTGTCACCGGTTTCACATATTACTTACAGACATGGGTTATAGAGAAGAAAGGACCTGTGTTTTCTGCCTTGTCAACGCCACTGGCTCTGATTATTACAATCTTCTCCTCTGCAATTCTCTTGGGCGAGATAATAAGTTTGGGAAGCCTTTTAGGTGGGTTTCTATTGGTTCTAGGACTATACAGCGTGCTGTGGGGAAAGAGCAAGGAGCAAACACCAAAAGCCTCNCTAGACTTGGAGCAACGAGCTGGAACGGGTGTTAATTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00096	84010	87667	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

cellular_component

GO:0016020 membrane

GO:0016021 integral component of membrane

molecular_function
GO:0022857 transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000096s00005917.1	PF00892.15	EamA	16	133	2.20E-10
Glyur000096s00005917.1	PF00892.15	EamA	196	324	1.10E-11

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.289
SRR1783600	control	0.400
SRR1783602	moderate drought stress	0.227
SRR1811619	moderate drought stress	0.188

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.434
DRR006520	Root Summer glycyrrhizin high producing strain	2.694
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	1.046
DRR006524	Root Summer glycyrrhizin low producing strain	1.218
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.039
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	31.417
SRR2868004	Drought Stress (root)	36.642
SRR2967015	Control (root)	33.065

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.127
SRR9715740	Leaf	0.056
SRR9715741	Leaf	0.000
SRR9715739	Root	1.171
SRR9715742	Root	2.466
SRR9715743	Root	2.403

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.427
SRR8749031	Uninduced	0.905
SRR8749032	Uninduced	1.295

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.303
SRR8400027	Control - Root	1.479