Gene detail information of Glyur000096s00005916 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G18465.1 | 2.00E-27 | Chaperone DnaJ-domain superfamily protein |
| NR | XP_004502898.1 | 1.03E-125 | PREDICTED: uncharacterized protein LOC101501928 isoform X2 [Cicer arietinum] |
| trEMBL | tr|G7JAW9|G7JAW9_MEDTR | 1.00E-115 | Chaperone DnaJ domain protein {ECO:0000313|EMBL:AES72791.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00096 | 78495 | 82738 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000096s00005916.1 | PF00226.26 | DnaJ | 259 | 314 | 5.50E-10 |
| Glyur000096s00005916.2 | PF00226.26 | DnaJ | 246 | 301 | 5.10E-10 |
| Glyur000096s00005916.3 | PF00226.26 | DnaJ | 209 | 264 | 4.10E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 29.780 |
| SRR1783600 | control | 29.866 |
| SRR1783602 | moderate drought stress | 28.376 |
| SRR1811619 | moderate drought stress | 28.092 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.472 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.722 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.413 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 17.010 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 23.456 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.160 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.404 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.266 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.751 |
| SRR2868004 | Drought Stress (root) | 19.600 |
| SRR2967015 | Control (root) | 17.186 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.991 |
| SRR9715740 | Leaf | 16.643 |
| SRR9715741 | Leaf | 15.727 |
| SRR9715739 | Root | 1.125 |
| SRR9715742 | Root | 6.754 |
| SRR9715743 | Root | 7.228 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.992 |
| SRR8749028 | MeJA induced 9h | 4.348 |
| SRR8749029 | MeJA induced 9h | 3.298 |
| SRR8749030 | Uninduced | 4.833 |
| SRR8749031 | Uninduced | 3.169 |
| SRR8749032 | Uninduced | 3.075 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.571 |
| SRR8400027 | Control - Root | 15.734 |