Gene detail

Gene detail information of Glyur000096s00005897

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G49160.2	0	Protein kinase superfamily protein
NR	XP_004502910.1	0	PREDICTED: probable serine/threonine-protein kinase WNK6-like [Cicer arietinum]
COG	YP_003797667.1	5.00E-20	putative serine/threonine protein kinase [Candidatus Nitrospira defluvii]
Swissprot	tr\|Q8LST2\|WNK7_ARATH	0	Probable serine/threonine-protein kinase WNK7
trEMBL	tr\|A0A072VBM5\|A0A072VBM5_MEDTR	0	WNK kinase {ECO:0000313\|EMBL:KEH35590.1}

Sequence

Transcript Sequence

>Glyur000096s00005897.1
ATGGGTTTGGTGGATACAGAATGCTCAGAGGAGGGTTCAGGGCTTCTAGAGCCTCCTGATCCTGATGTTCTTGAAATTGATCCTACTTGTCGCTACATCAGGTATAAGGAAGTAATTGGCAAAGGAGCTTTCAAGACGGTGTATCCATTCTACAAGGCATTTGATGAAATCAATGGACTTGAAGTTGCATGGAGCCAAGTCCGGATCGATGAGGTATTGCAGTCACCGGGTGACCTAGAGAGGTTGTACTCAGAAGTGCATCTATTGAAGTCATTGAAGCACAATAACATTGTAAGGTTCTACAATTCCTGGATTGATGACAAGCACAGGACTGTTAACATGATTACTGAGTTGTTCACCTCAGGGAGCCTCAGACAGTACCGTAAGAAACACAAGAAGGTTGACACGAAAGCTGTTAAAGGATGGGCAAGACAGATTTTAATGGGTTTAAACTACCTCCATAATCACAACCCACCTATTATACATAGGGACCTCAAATGTGATAACATATTTATAAATGGTCACCAAGGAGAAGTTAAAATTGGAGATCTGGGGTTGGCAACTCTCATGAAACAGACTAATGCCAAAAGTGTAATTGGAACCCCGGAGTTTATGGCACCTGAACTGTATGATGAAAATTACAATGAATTAGCTGACATATATTCTTTTGGGATGTGCATGCTTGAGTTGATGACTTCTCAGTATCCTTACAGTGAATGTAGAAACTCGGCTCAGATATACAAGAAAGTTTCGTCTGGAATAAAGCCTGTTGCACTTTCCAAAATCAAAGATCCAGAAATAAAAGCGTTTATTGAGAAATGTCTTGTCCCAGCATCTCAAAGATTGTCAGCAAAGGAGCTTTTGGTGGACCCTTTTCTCAAAGTGAATGGTTCGGCAAAGAACCGTCCTCTTCCATTACCAGATATTGTTCTTCCCAAATTTGGAGCCTTTGAAAATCGTTGTCTGATGTCAGAAGGTCCTGCTAGTGCACGTATTGGATCCATTTCAATGGATCTTGGTGATGCCAATGAGCTACCGTTGATAACTGTAGTTTATAATTCTGTTGATGATGCATCGTCAGCTCCTCCGTGTGTTGAGATACGAAGGTTGAAGGGAGGCGATATATTCTTCCTAAAAGGCGAAGAAAATGATGCAAACTCTGTATCATTAGTTCTCCGGATATCTGATCAGAGTGGGCGAGCAAGAAATATCCATTTCATATTTTACCTCGACAGTGGTACGGCTATCTCGGTTTCAAGTGAGATGGTTGAGCAACTCGAACTCGCCGAGCATAACGTTAAATTCATCGCCGAGTTAATCGATCTACTATTGATAACCATGGTTCCTGATTGGAAACCTTGTGTAGTGATTGATCACTTAGTTTCTCCAAACGGTAAGCGAACTCGTCTGAGCCAACAGAAAAGAGACCCAGAAGTGGCAAAATACCAAGAAAGCTCATATGATTCTAACCAAATTGTGGCAGCAGAAAAAGAAAGCCATGATACTGTGTATTTTTATGAGGTTTTGTCTCATGCAAGCATTGGTCTTCAAAGAGAAATAAAGACAGATGATATGTGTTCTGTGAAGTCGTATACTTCTGCAGCATCAGACTTCAATGATAAGAATATTTCTGGCGTTTCATTCAAGTCTGTTAGTTCACAATTTACAAACTTCAACTTATCTACCAAGAGTGTAGGGAGTCAAACCTCACTTGGATCCGAAATTGGGGTTCCATGCATGGAAAGCAATAATTATTCCATCAGTGCTTCCTCCTTGTCTGAACCTGGGGATGAGTTGAAAATAGAGTTAGAGAAGATTGAACGGCAATTTCAAGAGGCGATTAAAGATTTATCCAAAAGAAGACATGAGGCCATCATGGAGACCCAAAGGAGGTTGTCACAAAAAGTACAATCATAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00096	18047	20687	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.1.5.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000096s00005897.1	PF00069.20	Pkinase	35	293	2.30E-52

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.082
SRR1783600	control	2.173
SRR1783602	moderate drought stress	3.044
SRR1811619	moderate drought stress	3.148

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.241
DRR006520	Root Summer glycyrrhizin high producing strain	3.436
DRR006521	Root Winter glycyrrhizin high producing strain	9.158
DRR006522	Root Winter glycyrrhizin high producing strain	9.105
DRR006523	Root Summer glycyrrhizin low producing strain	2.919
DRR006524	Root Summer glycyrrhizin low producing strain	2.992
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.298
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.242

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	5.899
SRR2868004	Drought Stress (root)	6.592
SRR2967015	Control (root)	6.666

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.892
SRR9715740	Leaf	2.298
SRR9715741	Leaf	3.422
SRR9715739	Root	0.609
SRR9715742	Root	1.628
SRR9715743	Root	0.832

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	5.619
SRR8749028	MeJA induced 9h	7.849
SRR8749029	MeJA induced 9h	4.946
SRR8749030	Uninduced	8.575
SRR8749031	Uninduced	8.271
SRR8749032	Uninduced	10.345

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	8.749
SRR8400027	Control - Root	11.902