Gene detail

Gene detail information of Glyur000095s00007074.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G63010.1	3.00E-147	alpha/beta-Hydrolases superfamily protein
NR	XP_003591590.1	0	Gibberellic acid receptor-b [Medicago truncatula]
COG	YP_001838072.1	6.00E-28	putative triacylglycerol lipase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)']
Swissprot	tr\|Q9LYC1\|GID1B_ARATH	0	Gibberellin receptor GID1B
trEMBL	tr\|G7I2T6\|G7I2T6_MEDTR	0	Gibberellin receptor GID1c-like protein {ECO:0000313\|EMBL:AES61841.1}

Sequence

Transcript Sequence

>Glyur000095s00007074.1
AGTATTTGTTTTTTTATATAAAAATGAAACGGTGGAACCCATATAAACAGTTTAATTCGGCCGCCAGCTTTGTCGTCTCTCTCGTCTCCGTTCCCATTCCCGTCGTTCCTTTGCGTTTGACTCTCTCTCTCTCTCTCTCTCTCTCTGTTGTGTTTCTCTCTCCACCACTCCTTCTTATCATTCTCATGCCTCTCCCCCGCTTCTCTCTCTCCTTGTTTTCCTGATATGTGTGATCTCTCTGAGCTCCCTCTGTTCCCTTTGTTTCACTCTTCACATAATAATAACATAGAAATAGAAGAATAGAAACTCTCTCTCTCCCTTCTTAAACCGACAAATCAATCGACCCTGCAGTACCCTCTTCCCGTTTCATATTTATCTCTATTTCTCATTATCATTGTGATTATTATTATGAGGCGGCATAAAAGGTCGGTTATTGCGAGCGTGAAGATCACTNTTGCTTTTTAAATTTTAAGCGTGTTTTTTTGGTTTCTCCGGATTTGGTTTTGAATCACTGCTATAGACACAAGAGAGCGAGAACAGACATGACTGGAAGTAATGAAGTCAACCTCAATGAATCTAAGAGTGTTGTTCCACTCAATACTTGGGTTCTTATCTCCAATTTCAAGCTGGCTTATAATCTACTAAGGCGTGCTGATGGAACATTCAATCGAGAGTTGGCAGAGTTCCTTGACCGCAAGGTCCCCGCAAATTCAATTCCTGTTGATGGGGTATTCTCTTTTGATCATGTCGATCGAAACACCGGCCTCTTCAACCGTGTGTATCAACTGGCTCCTGAAAATGTTACTAGGTGGGGCATCATAGAGCTGGAAAAGCCCTTGAGCACCACAGAGATTGTCCCAATCATAATCTTCTTCCATGGGGGAAGCTTCTCTCATTCCTCTGCCAATAGTGCTATCTATGACACTTTCTGCCGCCGCCTCGTGAGCATTTGTAAGGCTGTTGTGGTTTCCGTAAACTACCGGCGATCGCCCGAGCACCGGTACCCATGTGCCTATGATGATGGCTGGGCTGCTCTTAAGTGGGTTAAGTCAAGGACATGGCTTCAGAGTGGAAAGGATTCTAAGGTCTATGTGTACATGGCTGGGGATAGTTCTGGTGGTAATATTGCACACCATGTGGCAGTGAGGGCTGCTGAGGAAGATGTTGAGGTACTAGGAAACATCCTTCTTCATCCACTCTTTGGTGGGGAGAAGCGTACCGAGTCGGAGAAGAAACTGGACGGGAAGTACTTTGTGAAGTTGCAAGACCGTGATTGGTATTGGAGAGCTTTCCTTCCAGAAGGGGAGGATAGAGACCATCCTGCTTGTAACCCATTTGGCCCCAAGGGGAAAAGCATTGCAGGACTCAAGTTCCCCAAAAGCCTTGTTTGTGTGGCTGGTTTGGATCTTCTCCAAGATTGGCAATTGGAATATGTGGAAGGTCTCAAGAATTCTGGCCATGATGCCAAACTTCTTTACCTAAAGGAGGCCACCATCGGTTTCTACTTCTTGCCTAACAATGATCATTTTTATTGCCTCATGAAGGAGATNAGCAGCTTCGTGAATTCTAACTGTTAATATACTGCTGCTACTGCTACTACTACTTAACCTTGCTTACAGAAAGGCCATACATAACTAAAAGCCTGACATTTCACCTGGGGTTCTCTTTTTTTTATCTATTTTTGTATTTTTTTTTCTTGTCCCTACTATATAGTGGTGGTGTGTAGTTATTAAAATTGTGTAGCATTACTCACTGTCATAACATCTATGGTGGTAAATCTGAGCTTTCTGTAACCAGTGGACTACTGCTTCCTGTTCTCTGCCCATATCTTTTGAAGGGTAGCTCCAGTTTCAGCCGTCTGAGGTAACCAGAGTTCAGTTCATTTGTGGGGTTTGGCTGTACCACCATATACAAAGCTTACCCCATTTTACTTTTTCGACCTCAAAAGCAAGAGGGAGATACATGATAGGGCTTGGCTGATCACTCTTTGATTAAGTGAGTGTCTTTGTGTTGTATAACTAATATTGAATGGGAACTGGAGTAGATCCCATCCTGTTATGAACT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00095	358478	361197	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K14493	GID1	EC:3.-.-.-	Plant hormone signal transduction	map04075

Gene Ontology

biological_process
GO:0008152 metabolic process

molecular_function
GO:0016787 hydrolase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000095s00007074.1	PF07859.8	Abhydrolase_3	108	321	1.40E-58

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	17.622
SRR1783600	control	17.733
SRR1783602	moderate drought stress	15.999
SRR1811619	moderate drought stress	15.911

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	12.090
DRR006520	Root Summer glycyrrhizin high producing strain	12.032
DRR006521	Root Winter glycyrrhizin high producing strain	36.715
DRR006522	Root Winter glycyrrhizin high producing strain	35.367
DRR006523	Root Summer glycyrrhizin low producing strain	24.376
DRR006524	Root Summer glycyrrhizin low producing strain	24.669
DRR006525	Leaf Summer glycyrrhizin high producing strain	9.718
DRR006526	Leaf Summer glycyrrhizin high producing strain	9.838

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	62.973
SRR2868004	Drought Stress (root)	73.646
SRR2967015	Control (root)	58.700

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	46.936
SRR9715740	Leaf	64.422
SRR9715741	Leaf	58.186
SRR9715739	Root	65.686
SRR9715742	Root	51.761
SRR9715743	Root	57.053

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	125.234
SRR8749028	MeJA induced 9h	214.146
SRR8749029	MeJA induced 9h	109.150
SRR8749030	Uninduced	95.937
SRR8749031	Uninduced	54.053
SRR8749032	Uninduced	72.510

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	44.062
SRR8400027	Control - Root	30.808