Gene detail information of Glyur000095s00007052 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G02920.2 | 5.00E-54 | |
| NR | KHN18900.1 | 0 | hypothetical protein glysoja_028269 [Glycine soja] |
| trEMBL | tr|I1JFC8|I1JFC8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G16850.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00095 | 216659 | 220464 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 25.608 |
| SRR1783600 | control | 25.678 |
| SRR1783602 | moderate drought stress | 29.240 |
| SRR1811619 | moderate drought stress | 29.550 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.464 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.354 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 44.318 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 42.695 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.784 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 21.630 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 119.240 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 119.070 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.498 |
| SRR2868004 | Drought Stress (root) | 13.591 |
| SRR2967015 | Control (root) | 12.578 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 124.628 |
| SRR9715740 | Leaf | 211.891 |
| SRR9715741 | Leaf | 132.012 |
| SRR9715739 | Root | 8.285 |
| SRR9715742 | Root | 12.225 |
| SRR9715743 | Root | 10.499 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.233 |
| SRR8749028 | MeJA induced 9h | 30.308 |
| SRR8749029 | MeJA induced 9h | 12.442 |
| SRR8749030 | Uninduced | 12.281 |
| SRR8749031 | Uninduced | 11.014 |
| SRR8749032 | Uninduced | 12.262 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.498 |
| SRR8400027 | Control - Root | 16.406 |