Gene detail

Gene detail information of Glyur000095s00007047

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT1G04650.1
NR	XP_004496296.1	PREDICTED: uncharacterized protein LOC101493733 [Cicer arietinum]
trEMBL	tr\|K7N4J0\|K7N4J0_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA20G33960.2} (Fragment)

Sequence

Transcript Sequence

>Glyur000095s00007047.1
GGTTTCACTTCCACTCTGTTTCTTTCGAAGCAGGTCGTTGAGGATCGTGTTCAATTGTTCACTGATCTCGGATGTTTAGACTTGAAGGACATTTCCGATTCCGATCATGCTTCCGTCTTGAACTGCATCGCAGCTAGNATCTGGTGTGGGAAGCATCTAAAGATGACTCTTTTGTCAACAGAAGAATCTCAGGAAGATGAACATAGCTCTGTATTTTACCAGCTTCTTTTGGAGATCTTAAGATTTTCTGCATCAACTTTTTCAGCCTTGCTGGAAATAACTGATATTGGCAACAAGGAGTTGATGGACAATGTTGAATCCCTCATTATAGAAGCATTGAATCTAACTAAAGATTCTATATCAGATGCTAAGAAAATTCAATCATTTGGATCAGAAATATTGAAGGTCGCACACATGGTCATTGATGTTGTTGTAAAACTATGCAAGATGCGTTCTGAATTAATAAACTGGGAGGCTTGTGATGAAAAACAGTTGAGGCTTCACAAACCTATTAATGTTGGCCATGCTATCAACATAACAAAATATGCAGTAGAAAAGCTGTCTCAGATTGGTATCCTTGCTGCAAATGATGGTGGCAATTCAGTCAATATTCTTAATATCTGCTGGAAAGGCNTTGTCTCTTTGCTTCAAATTGGTGGCGGACATTTTACAGAAGTGAACGTAGCAAGTATAGTGGTATCTTTGCTTGCATTGATAACTGANCCTTTGAAATGTGCTGCAGAGGTTTGGTCATCATCACTGAATGAAACCATTTCTGTAACTGAAGCTAAAAGGATATTTGTGCCAGTGAAATTTTACCTGATTAATGCAGTTAAAATATGCTCACTGTATCCTCATCAGACCTATACAGTGTACAGGGAGATTACACAGTGTGTTCTCAGNATCACTTCTTTTTGGATTTTTGCAAGTAATGAAAATCTGAAATATGCATCTGCTGTAATTGCGGAGCTTCTGGAGGAAACAACATTGGATTTGGTATTGTCTTTGCTAAATTCTGATAAACTAAAACTGAAACAGAAGCTTGAGGTACTGGAGTGGCTATTCATTAATGACGGGGATTCTCATTCTGGCCGTGATGGTCCAACCTTAGCTGATTGTANCTTTACATCGGTTAACGAAATTTTCTTAAGTAGTTGTGAAGGTCTAAGCATAGAAAGAATACTAGTACTTGGCCGAGTTGTGTTGTTTATTAGCTTCCTCAGATATNCTCTCAAGCTCGATGAAGATGTGAAAGTAGCAATAACTCAGAAACTTAATTGGTTTTTGGANATTTTAGTTGAGGAAGATGTATATTCTCATATGCTTGTTTTGCAATTTCCTTTATTCTATGGCTCTGGAAAAACAGTAGAACTGGTGTGGCATCCCATGTTTACAACCCTCCTGCAAGCATTTAAAACCTTCATGATTGTGATCTCTTCAAGTACAGCTTGGGGGGAGTTGGAGTCTGTCTTACTAGAGAATTTCTTTCATCCCCACTTTCTTTGCCAGGAGATTGTGATGGAATGCTGGTGCTTTGTGCTGCGACATGCTGAAGCCCAAATGGCAAGCAACATCATTAGCAAACTATGTTCATTACTTAAGGTGCTGGCATCTTCAGACTCAGTTTTCCTCCCTCATTCTCCCTTCAGGAAACTGGCAAGATCAATCTGCTTGCTTCTATCCTATGGTGCACAGTCGATGGTTGATGAGGTGTACACGTCTCTTGTTGGTGATGGGAGGTCACAGTTGTCATTAATTTTGTGTTTGGCNCTGTTCATCGAAGGTTTTCCACTTGATTTACTGACAGATGAGTTGAGAAACACTTCCATTCAAAGAATTATATCNGATTATTTTGACTTCATAGACAACTTTGATGAAGCATCATTGATGGCATGCTCCTCTGGTTTGTTTGGCATTCCCGTTTTTATTCTTTCAGCTTCATTGCAATCACTCCAGGTTGGACTATCTGATATTGATGCAAGGACGTTAAAGTTTTTGGTCTCACTTACTTCTAACTATAAAAGTACTGTAGACAAAGTAATCAAGGACNGTTGTCTTCGGCTTTTCGGTGAAATCCTAGGGATCATCTCATATTTGAAGCATCTGTACACATCGAATGATATTGAACAAGCCATAGTGGAGATTGAAAATATCTTTATCACCGAGCCTCCGGACCTTTTGTACAAATGCAAACCACATTTGGCCCATTTCCTGACGGGACTTATTCACATGGATATTTCAGAAAGNGAGGATGGTGATGCAAAAAGCCGTGCTGCATGGGAATTATATCACTTGCTCTTGAAAGAGCGGCACTGGGCATTAATTCACTTGGCAATAACCGCTTTTGGGTATTTTGCTGCTCGTACAAAGTGCAGTCAGCTATGGAGATTTGTTCCACAGGATGCAGCACTTTCATATGATGTAGTTTCAGGAGTGGAAGCCAATCAGGAGAGGTTTATGCGNGAGTTTGGAGCATTTCTTAATAAGCAAATGGCTCTTCCGACAGTTGCACCAAGTCCTGAACAACTTGAGCTGCTACGAGGAGAAGGTCTTGTATTGAAACAGATGGTCCATAAGGTTTTAGTTATTGCTGAACAGAGAGAGGGATNTGAGAGCATGGAAGTTGATGACAAGAACCAATCAAAGAAAAAAAGGAAACTTCCTGATGGAATTAGCAAAGGAGTGGAATTGCTGAAAAGCGGTTTAAAGATTATTGGCGACGGTCTTTCCCAGTGGCAGCTTAATCAATTTGATACCAATGAACTGCAGATCAAGTATTCCACTCAGTTTTCTCGACTTGAAGACGTAATTACTCACTTTGAGGAATTGACCGGGGAGCGGTGAGGTATGTTCATCTTCTATTCAGAGCAATTTCCGAGGTTNGTTACTCGTTGATGCATGTTTTTATTATAAAGAAATCTGATAAATCAACGAAATCTACTCCATAAATCTGAAGTGTCAGATAATCTTCTGCAAAATTTAGTTCCATCTCACCCCCTATCTTATATTCTAATTTATTTAGCAACTAATAAATATATTCTGCATNGAAAGATATTTTTTAATATTTAAAAATAAAATTAAAAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00095	182187	187834	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000095s00007047.1	PF14868.1	DUF4487	202	794	2.20E-146

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.507
SRR1783600	control	1.555
SRR1783602	moderate drought stress	2.906
SRR1811619	moderate drought stress	2.854

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.220
DRR006520	Root Summer glycyrrhizin high producing strain	3.275
DRR006521	Root Winter glycyrrhizin high producing strain	2.804
DRR006522	Root Winter glycyrrhizin high producing strain	2.835
DRR006523	Root Summer glycyrrhizin low producing strain	2.004
DRR006524	Root Summer glycyrrhizin low producing strain	2.022
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.866
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.837

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	3.724
SRR2868004	Drought Stress (root)	2.998
SRR2967015	Control (root)	3.304

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.570
SRR9715740	Leaf	0.185
SRR9715741	Leaf	0.234
SRR9715739	Root	0.363
SRR9715742	Root	1.067
SRR9715743	Root	0.449

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	5.749
SRR8749028	MeJA induced 9h	9.829
SRR8749029	MeJA induced 9h	3.666
SRR8749030	Uninduced	3.320
SRR8749031	Uninduced	3.169
SRR8749032	Uninduced	2.734

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.345
SRR8400027	Control - Root	2.617