Gene detail information of Glyur000095s00007040 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G13620.1 | 2.00E-05 | Integrase-type DNA-binding superfamily protein |
| NR | XP_006606324.1 | 2.76E-74 | PREDICTED: ethylene-responsive transcription factor ERF062-like [Glycine max] |
| Swissprot | tr|Q9SVQ0|ERF62_ARATH | 5.00E-06 | Ethylene-responsive transcription factor ERF062 |
| trEMBL | tr|I1NHW3|I1NHW3_SOYBN | 1.00E-74 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G33890.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00095 | 142893 | 144149 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.519 |
| SRR1783600 | control | 3.271 |
| SRR1783602 | moderate drought stress | 1.876 |
| SRR1811619 | moderate drought stress | 1.740 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.087 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.983 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.506 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.552 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.023 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.893 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.625 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.630 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.743 |
| SRR2868004 | Drought Stress (root) | 8.812 |
| SRR2967015 | Control (root) | 4.236 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.826 |
| SRR9715740 | Leaf | 1.409 |
| SRR9715741 | Leaf | 1.769 |
| SRR9715739 | Root | 0.566 |
| SRR9715742 | Root | 1.239 |
| SRR9715743 | Root | 1.134 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.400 |
| SRR8749028 | MeJA induced 9h | 3.174 |
| SRR8749029 | MeJA induced 9h | 1.120 |
| SRR8749030 | Uninduced | 3.069 |
| SRR8749031 | Uninduced | 2.189 |
| SRR8749032 | Uninduced | 1.782 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.488 |
| SRR8400027 | Control - Root | 4.329 |