Gene detail information of Glyur000095s00007037 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G07475.1 | 2.00E-36 | Cupredoxin superfamily protein |
| NR | XP_004496082.1 | 1.75E-90 | PREDICTED: blue copper protein-like [Cicer arietinum] |
| Swissprot | tr|Q41001|BCP_PEA | 4.00E-23 | Blue copper protein (Precursor) |
| trEMBL | tr|I1NHW1|I1NHW1_SOYBN | 2.00E-87 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G33870.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00095 | 135662 | 136550 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000095s00007037.1 | PF02298.12 | Cu_bind_like | 33 | 111 | 1.40E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.453 |
| SRR1783600 | control | 6.263 |
| SRR1783602 | moderate drought stress | 2.783 |
| SRR1811619 | moderate drought stress | 2.873 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 65.896 |
| SRR2868004 | Drought Stress (root) | 23.522 |
| SRR2967015 | Control (root) | 28.978 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.119 |
| SRR9715740 | Leaf | 0.265 |
| SRR9715741 | Leaf | 0.323 |
| SRR9715739 | Root | 4.469 |
| SRR9715742 | Root | 2.295 |
| SRR9715743 | Root | 1.672 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.126 |
| SRR8749028 | MeJA induced 9h | 0.058 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 7.395 |
| SRR8749031 | Uninduced | 16.011 |
| SRR8749032 | Uninduced | 0.863 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 65.881 |
| SRR8400027 | Control - Root | 57.795 |