Gene detail information of Glyur000095s00007034 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G51230.3 | 3.00E-47 | VEFS-Box of polycomb protein |
| NR | XP_006589030.1 | 7.07E-89 | PREDICTED: polycomb group protein EMBRYONIC FLOWER 2-like isoform X3 [Glycine max] |
| Swissprot | tr|Q8L6Y4|EMF2_ARATH | 9.00E-56 | Polycomb group protein EMBRYONIC FLOWER 2 |
| trEMBL | tr|K7LIV2|K7LIV2_SOYBN | 3.00E-89 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G23295.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00095 | 120832 | 130712 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000095s00007034.1 | PF09733.4 | VEFS-Box | 406 | 439 | 2.60E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.474 |
| SRR1783600 | control | 2.424 |
| SRR1783602 | moderate drought stress | 2.788 |
| SRR1811619 | moderate drought stress | 2.656 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.908 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.914 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.860 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.481 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.812 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.035 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.704 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.530 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.471 |
| SRR2868004 | Drought Stress (root) | 5.769 |
| SRR2967015 | Control (root) | 6.141 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.709 |
| SRR9715740 | Leaf | 6.345 |
| SRR9715741 | Leaf | 4.368 |
| SRR9715739 | Root | 0.479 |
| SRR9715742 | Root | 1.731 |
| SRR9715743 | Root | 1.417 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.505 |
| SRR8749028 | MeJA induced 9h | 9.231 |
| SRR8749029 | MeJA induced 9h | 4.199 |
| SRR8749030 | Uninduced | 6.059 |
| SRR8749031 | Uninduced | 1.571 |
| SRR8749032 | Uninduced | 2.513 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.648 |
| SRR8400027 | Control - Root | 6.129 |