Gene detail information of Glyur000095s00007027 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G07590.1 | 0 | Transducin/WD40 repeat-like superfamily protein |
| NR | XP_004496089.1 | 0 | PREDICTED: WD repeat-containing protein WRAP73-like [Cicer arietinum] |
| trEMBL | tr|I1NHV4|I1NHV4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G33770.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00095 | 89271 | 93790 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000095s00007027.1 | PF00400.27 | WD40 | 224 | 248 | 0.00056 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.759 |
| SRR1783600 | control | 14.793 |
| SRR1783602 | moderate drought stress | 11.900 |
| SRR1811619 | moderate drought stress | 11.640 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.674 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.365 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.669 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.738 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.442 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.575 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.065 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.959 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.103 |
| SRR2868004 | Drought Stress (root) | 9.301 |
| SRR2967015 | Control (root) | 11.166 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.431 |
| SRR9715740 | Leaf | 3.977 |
| SRR9715741 | Leaf | 3.837 |
| SRR9715739 | Root | 7.302 |
| SRR9715742 | Root | 5.203 |
| SRR9715743 | Root | 6.255 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.069 |
| SRR8749028 | MeJA induced 9h | 7.640 |
| SRR8749029 | MeJA induced 9h | 7.463 |
| SRR8749030 | Uninduced | 2.483 |
| SRR8749031 | Uninduced | 1.296 |
| SRR8749032 | Uninduced | 2.327 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.595 |
| SRR8400027 | Control - Root | 15.209 |