Gene detail information of Glyur000095s00007024 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G10650.1 | 7.00E-90 | |
| NR | XP_004496093.1 | 0 | PREDICTED: platelet binding protein GspB-like [Cicer arietinum] |
| Swissprot | tr|Q9CAF4|NUP1_ARATH | 1.00E-101 | Nuclear pore complex protein NUP1 |
| trEMBL | tr|K7LKD7|K7LKD7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G33880.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00095 | 67719 | 74844 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 36.016 |
| SRR1783600 | control | 35.860 |
| SRR1783602 | moderate drought stress | 66.405 |
| SRR1811619 | moderate drought stress | 65.533 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.224 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.873 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.303 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.346 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 25.818 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 25.623 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.832 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.839 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.809 |
| SRR2868004 | Drought Stress (root) | 20.275 |
| SRR2967015 | Control (root) | 24.192 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.047 |
| SRR9715740 | Leaf | 10.128 |
| SRR9715741 | Leaf | 10.355 |
| SRR9715739 | Root | 16.670 |
| SRR9715742 | Root | 30.357 |
| SRR9715743 | Root | 25.478 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.836 |
| SRR8749028 | MeJA induced 9h | 19.746 |
| SRR8749029 | MeJA induced 9h | 9.458 |
| SRR8749030 | Uninduced | 6.139 |
| SRR8749031 | Uninduced | 6.557 |
| SRR8749032 | Uninduced | 4.959 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.235 |
| SRR8400027 | Control - Root | 17.783 |