Gene detail information of Glyur000095s00007022 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G10030.2 | 2.00E-27 | TGACG motif-binding factor 4 |
| NR | XP_003591665.1 | 8.93E-91 | Transcription factor bZIP [Medicago truncatula] |
| Swissprot | tr|Q39162|TGA4_ARATH | 2.00E-40 | Transcription factor TGA4 |
| trEMBL | tr|G7I311|G7I311_MEDTR | 3.00E-91 | Transcription factor bZIP protein, putative {ECO:0000313|EMBL:AES61916.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00095 | 55092 | 57218 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000095s00007022.1 | PF14144.1 | DOG1 | 53 | 133 | 2.50E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.960 |
| SRR1783600 | control | 4.869 |
| SRR1783602 | moderate drought stress | 2.060 |
| SRR1811619 | moderate drought stress | 1.955 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.436 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.260 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.214 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.877 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.491 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.016 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 48.003 |
| SRR2868004 | Drought Stress (root) | 23.285 |
| SRR2967015 | Control (root) | 18.691 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.498 |
| SRR9715740 | Leaf | 0.559 |
| SRR9715741 | Leaf | 0.977 |
| SRR9715739 | Root | 0.993 |
| SRR9715742 | Root | 9.163 |
| SRR9715743 | Root | 6.769 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.016 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.039 |
| SRR8749032 | Uninduced | 0.086 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.726 |
| SRR8400027 | Control - Root | 12.337 |