Gene detail

Gene detail information of Glyur000095s00007017

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G06470.1	1.00E-48	Glutaredoxin family protein
NR	XP_004496102.1	0	PREDICTED: uncharacterized protein At3g28850-like [Cicer arietinum]
Swissprot	tr\|Q9FLE8\|Y5986_ARATH	3.00E-33	Uncharacterized protein At5g39865
trEMBL	tr\|I1LCK1\|I1LCK1_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA10G33920.1}

Sequence

Transcript Sequence

>Glyur000095s00007017.1
ATGAAAGGGGTGAAAGGAAAATTGCTGAAGAAGCTGAAATCAATCAAACAGATTGGGTATCTGAAGCCAGATCGCATTCTTCAGGTGAAGGCCTCAGATGGGTACGTTGATTTCCTCCCCAAGATCTCATCTTTCAATATATCCAACCCATTTGTTTCCCGAGAGAATGAGCCCAAGAAAACTGTCCAGAGCTGCGAGAAGGTGCAGCATGAGGAACCCGAGGTCATTGACGTGTCAGAGCTCATGAGAGACCTGGAAGAAGAAGATGAAGAAGAGATGGAATTGGATGATTACAATGACAACAAAGAGAACATTGGACCATGTTCACCGAAATCCAAACACCAATTTGGTATTTCACAGAATGGAGTCAGAGGAGAAACAGAGTCAAAACAGAGTGGGGTTTTGAAAGAAAAAAGATCACCACTATCATCAAGAGCTGATAGTGGTAATAGCAAAAGGAAAACCCCTCCGTCCGACACTATGTTGTTTCGGAAGCCAGACTTGGATTCCGGCAGCCTTTTCGATCCGAATCTACTGGCCGCATTCGAGGAAGCTGTGAAGGAACATGCTAGAATGACAGAAGAGCAGAGAAGAGCCAGAGTTGAAGCAGAGCCAGAGCCCTCACAGGAAGAGGAAGAAAATGAAGATGAAGTAGTAGACCCTTTGATGCTCTTTGAAGAGAAGTGTCCACCAGGGGGTGATGGCACTGTGGTTTTCTACACAACAACACTCAGGGGAATCAGAAAGACGTTTGAGGATTGCAACAAGGTTCGTTTCCTCCTGCAGAGTTTCAGGGTTCTGTATCTAGAGAGGGACATATCAATGGACAAGGGGTTCAGGGATGAGTTGTGGAGCATTTTGGATGGGAAAACATTGCCTCCAAGTCTTTTTGTGAAGGGGAGATACATAGGTGGAGCAGAGGAAGTTCTGAGTTTGCATGAACAAGGGAAGCTGAGGCAAATCCTTGAAGGNGTTCCAATGGATTGGTCTAATGGTCCATGTGATGCATGTGGTGGGGTAAGGTTTGTGCTGTGCTTCAAGTGTAATGGTAGCCATAAGGTCATTGCAGAAAACGAAGAGACCAATCAGTGCCCTCAGTGTAATGAGAATGGCTTGATTGTGTGTCCCTATTGTGGCGGCTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00095	36996	38138	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0045454 cell redox homeostasis

molecular_function

GO:0009055 electron carrier activity

GO:0015035 protein disulfide oxidoreductase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000095s00007017.1	PF00462.19	Glutaredoxin	237	303	5.30E-11

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.972
SRR1783600	control	4.139
SRR1783602	moderate drought stress	1.565
SRR1811619	moderate drought stress	1.704

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	4.649
DRR006520	Root Summer glycyrrhizin high producing strain	4.500
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.655
DRR006524	Root Summer glycyrrhizin low producing strain	0.484
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.431
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.486

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	8.939
SRR2868004	Drought Stress (root)	2.700
SRR2967015	Control (root)	3.773

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.024
SRR9715740	Leaf	0.000
SRR9715741	Leaf	0.620
SRR9715739	Root	1.111
SRR9715742	Root	1.829
SRR9715743	Root	2.140

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	8.265
SRR8749028	MeJA induced 9h	4.140
SRR8749029	MeJA induced 9h	3.202
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.022
SRR8749032	Uninduced	0.145

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	7.380
SRR8400027	Control - Root	7.425