Gene detail information of Glyur000094s00007891 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G12570.1 | 8.00E-05 | ubiquitin protein ligase 5 |
| NR | XP_003528704.2 | 1.23E-06 | PREDICTED: E3 ubiquitin-protein ligase UPL5-like [Glycine max] |
| trEMBL | tr|K7L3Y9|K7L3Y9_SOYBN | 1.00E-06 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G39553.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00094 | 301798 | 304672 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.213 |
| SRR1783600 | control | 0.969 |
| SRR1783602 | moderate drought stress | 3.089 |
| SRR1811619 | moderate drought stress | 3.068 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.509 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.540 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.346 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.838 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.303 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.858 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.328 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.122 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.532 |
| SRR2868004 | Drought Stress (root) | 0.893 |
| SRR2967015 | Control (root) | 1.407 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.387 |
| SRR9715740 | Leaf | 1.237 |
| SRR9715741 | Leaf | 0.324 |
| SRR9715739 | Root | 0.899 |
| SRR9715742 | Root | 0.580 |
| SRR9715743 | Root | 1.204 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.909 |
| SRR8749028 | MeJA induced 9h | 2.235 |
| SRR8749029 | MeJA induced 9h | 2.874 |
| SRR8749030 | Uninduced | 2.158 |
| SRR8749031 | Uninduced | 1.068 |
| SRR8749032 | Uninduced | 2.028 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.193 |
| SRR8400027 | Control - Root | 2.967 |