Gene detail information of Glyur000094s00007878.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G32030.1 | 1.00E-42 | Acyl-CoA N-acyltransferases (NAT) superfamily protein |
| NR | XP_003610737.1 | 4.36E-102 | N-acetyltransferase, putative [Medicago truncatula] |
| COG | NP_623147.1 | 1.00E-27 | acetyltransferase [Thermoanaerobacter tengcongensis MB4] |
| trEMBL | tr|G7K3P2|G7K3P2_MEDTR | 2.00E-102 | Acetyltransferase (GNAT) domain protein {ECO:0000313|EMBL:AES93695.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00094 | 228736 | 229323 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GNAT |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000094s00007878.1 | PF13302.1 | Acetyltransf_3 | 26 | 165 | 5.90E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.070 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.065 |
| SRR1811619 | moderate drought stress | 0.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.287 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.219 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.759 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.741 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.139 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.820 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.635 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.011 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.160 |
| SRR2868004 | Drought Stress (root) | 9.626 |
| SRR2967015 | Control (root) | 8.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.688 |
| SRR9715740 | Leaf | 3.016 |
| SRR9715741 | Leaf | 10.637 |
| SRR9715739 | Root | 0.077 |
| SRR9715742 | Root | 9.201 |
| SRR9715743 | Root | 5.717 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.382 |
| SRR8749028 | MeJA induced 9h | 59.881 |
| SRR8749029 | MeJA induced 9h | 78.504 |
| SRR8749030 | Uninduced | 11.398 |
| SRR8749031 | Uninduced | 12.275 |
| SRR8749032 | Uninduced | 26.187 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.130 |
| SRR8400027 | Control - Root | 1.932 |