Gene detail information of Glyur000094s00007875 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G22550.1 | 3.00E-37 | Protein of unknown function (DUF581) |
| NR | KHN35172.1 | 1.99E-105 | hypothetical protein glysoja_004938 [Glycine soja] |
| trEMBL | tr|I1LFU6|I1LFU6_SOYBN | 1.00E-104 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G00870.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00094 | 219265 | 222463 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000094s00007875.1 | PF04570.9 | DUF581 | 231 | 278 | 2.00E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.300 |
| SRR1783600 | control | 12.443 |
| SRR1783602 | moderate drought stress | 15.439 |
| SRR1811619 | moderate drought stress | 15.622 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 38.794 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 38.735 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.354 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.492 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 32.627 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 32.947 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.959 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.893 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.636 |
| SRR2868004 | Drought Stress (root) | 8.912 |
| SRR2967015 | Control (root) | 7.187 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.103 |
| SRR9715740 | Leaf | 7.746 |
| SRR9715741 | Leaf | 7.914 |
| SRR9715739 | Root | 5.233 |
| SRR9715742 | Root | 16.520 |
| SRR9715743 | Root | 14.090 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 30.711 |
| SRR8749028 | MeJA induced 9h | 28.230 |
| SRR8749029 | MeJA induced 9h | 20.348 |
| SRR8749030 | Uninduced | 5.373 |
| SRR8749031 | Uninduced | 1.592 |
| SRR8749032 | Uninduced | 4.683 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.417 |
| SRR8400027 | Control - Root | 22.721 |