Gene detail information of Glyur000094s00007874 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G22540.1 | 2.00E-35 | Protein of unknown function (DUF1677) |
| NR | XP_003610735.1 | 2.49E-57 | hypothetical protein MTR_5g006430 [Medicago truncatula] |
| trEMBL | tr|G7K3P0|G7K3P0_MEDTR | 9.00E-58 | DUF1677 family protein {ECO:0000313|EMBL:AES93693.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00094 | 211990 | 212331 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000094s00007874.1 | PF07911.8 | DUF1677 | 2 | 89 | 1.20E-34 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.533 |
| SRR1783600 | control | 0.537 |
| SRR1783602 | moderate drought stress | 0.646 |
| SRR1811619 | moderate drought stress | 0.555 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.899 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.080 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.876 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.942 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.921 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.172 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.791 |
| SRR2868004 | Drought Stress (root) | 5.495 |
| SRR2967015 | Control (root) | 3.167 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.891 |
| SRR9715740 | Leaf | 0.404 |
| SRR9715741 | Leaf | 0.572 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 2.356 |
| SRR9715743 | Root | 1.307 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.354 |
| SRR8749028 | MeJA induced 9h | 0.143 |
| SRR8749029 | MeJA induced 9h | 0.315 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.042 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.551 |
| SRR8400027 | Control - Root | 0.485 |