Gene detail

Gene detail information of Glyur000094s00007867

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G45560.1	5.00E-117	cytochrome P450, family 76, subfamily C, polypeptide 1
NR	XP_004511453.1	0	PREDICTED: geraniol 8-hydroxylase-like [Cicer arietinum]
COG	YP_004303682.1	5.00E-37	cytochrome P450 [Polymorphum gilvum SL003B-26A1]
Swissprot	tr\|Q8VWZ7\|C76B6_CATRO	0	Geraniol 8-hydroxylase
trEMBL	tr\|K7LKI8\|K7LKI8_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA10G34850.2}

Sequence

Transcript Sequence

>Glyur000094s00007867.1
CAACGTTTCATTTCACAATTCACACCCTCTCCTCTCTCATTCCCTTTTGCTACAACTACAACTATCATCACTAGCTCCCAGCTGAGATGGATTTTGTAACTTGTGCACTGCTAACTCTGCTGACATGTACTGTCACAATTCATGTTCTACGTTCATTCCTTNCAAGAAGAAAACCAAACCACAAGCTTCCACCAGGACCCTCCCCACTTCCCATCATAGGGAACCTCCTTGAACTTGGTGACAAGCCCCATAAATCACTGGCCAAGCTTGCTAAGATTCACGGCCCTGTAATGAGCCTAAAGCTAGGCCAAGTCACAACCATTGTGGTCTCTTCAGCTGAGATGGCCAAAGAGGTTCTCNTAACCCATGACCACTTATTATCCAACAGAACCATCCCTCAATCTGTTTCGGTTCTCAACCACGAAAACTATAGCCTAGCATTCATCCCTGTCTCCCCTCTCTGGCGAGACTTGAGGAAAATATGCAACGGTCAGTTATTTGCACACAAGACTCTTGATGNTAGCCAACATGTTAGGCGTGAGAAAGTGCAACAGCTTCTTAGTGAAATCANTCAGAGTAGCCAAATGGGTGAGGCAGTGGATATTGGAACTGCGGTTTTCAAAACTACCATAAATTTATTGTCGAATACCATTTTCTCTGTGGATTTGGTTCAGTCTGCTGGTAAAGTGGGAGAGTTCAAGGACTTGGTGACTAATATCACTAAGTTGGTTGGAACACCAAACTTGGCTGATTATTTTCCTGTATTGAGAATGGTTGATCCACAAGGCATAAAAAGACGCCAGGCTAAGAATGTTGAGAAGGTGTTGGACATTTTTGGTAACTTGGCTAATCAAAGGTTGAAGCTAAGGGAAAAAGGCACAAATGTTGAGAGCCACAACAAAGACATGTTAGATGCCCTTCTCAACATTTCTCAAGAGAACAAGATGATGGACAAAACAATGATCGAGCATTTGTCACATGATCTGTTTGTTGCGGGGACGGATACAACAACATCAACATTAGAATGGGCAATGACAGAGCTCCTACTCAATCCAGAGGTTATGTCTAAAGCAGTAAAAGAACTTGAGTCAANCATTGGCAGAGGTAAACCAGTTGAGGAATCAGACATTGGCAAGCTCCCTTACTTGCAAGCAATAATAAAAGAGACATTCAGGTTGCACCCTCCAGTTCCATTTTTACTCCCTCGAAAAGCGGAGAAAGATGTGAACATATGTGGCTACACCATTCCAAAGGATGCACAAGTGTTGGTTAATGTGTGGACTATTGCTAGGGACCCAAGCATATGGAACAATCCGAATTTGTTTTGTCCAGAAAGGTTTCTAGTGTCTGATGTTGATGTTAAAGGTAGGAATTTTGAGCTTGCACCCTTTGGTGCTGGGCGACGGATTTGCCCTGGCATGCAACTGGCTATGAGGATGTTGCTCTTGATGTTGGGTTCATTGGTCAACTCATTTGATTGGAAGCTTGAAGATGGTGTGAGTTTAGAGGATGTGGATATGGATGACAAGTTTGGGATCACCTTACAAAAGGCTCAACCCCTGCGAGTTGTTCCAGTCAAAATAGAAGTTTAAAGTGGCATGCATCCACACTAATAGTAAAATAACAAGAGTTATATATTATTAATT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00094	183633	185586	-

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP76C1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000094s00007867.1	PF00067.17	p450	35	485	1.10E-106

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.567
SRR1783600	control	0.576
SRR1783602	moderate drought stress	0.023
SRR1811619	moderate drought stress	0.023

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.096
DRR006520	Root Summer glycyrrhizin high producing strain	3.454
DRR006521	Root Winter glycyrrhizin high producing strain	1.828
DRR006522	Root Winter glycyrrhizin high producing strain	1.917
DRR006523	Root Summer glycyrrhizin low producing strain	0.598
DRR006524	Root Summer glycyrrhizin low producing strain	0.618
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.056
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.056

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.639
SRR2868004	Drought Stress (root)	2.349
SRR2967015	Control (root)	1.098

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.000
SRR9715740	Leaf	0.038
SRR9715741	Leaf	0.072
SRR9715739	Root	1.121
SRR9715742	Root	4.167
SRR9715743	Root	3.671

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	20.883
SRR8749028	MeJA induced 9h	17.746
SRR8749029	MeJA induced 9h	4.050
SRR8749030	Uninduced	13.821
SRR8749031	Uninduced	0.281
SRR8749032	Uninduced	0.485

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.231
SRR8400027	Control - Root	0.052