Gene detail information of Glyur000094s00007851 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G26330.1 | 5.00E-47 | Cupredoxin superfamily protein |
| NR | XP_003610698.1 | 1.91E-93 | Early nodulin-like protein [Medicago truncatula] |
| Swissprot | tr|P80728|MAVI_CUCPE | 8.00E-39 | Mavicyanin |
| trEMBL | tr|G7K2C2|G7K2C2_MEDTR | 7.00E-94 | Uncharacterized protein {ECO:0000313|EMBL:AFK47323.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00094 | 109700 | 111093 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000094s00007851.1 | PF02298.12 | Cu_bind_like | 36 | 119 | 2.40E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.692 |
| SRR1783600 | control | 1.702 |
| SRR1783602 | moderate drought stress | 1.887 |
| SRR1811619 | moderate drought stress | 1.822 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.524 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 24.889 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.353 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.376 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.942 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.114 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.861 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 31.675 |
| SRR2868004 | Drought Stress (root) | 11.038 |
| SRR2967015 | Control (root) | 16.900 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.581 |
| SRR9715740 | Leaf | 0.170 |
| SRR9715741 | Leaf | 1.232 |
| SRR9715739 | Root | 1.316 |
| SRR9715742 | Root | 13.286 |
| SRR9715743 | Root | 11.426 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.010 |
| SRR8400027 | Control - Root | 6.672 |