Gene detail information of Glyur000094s00007848 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G26230.1 | 3.00E-37 | |
| NR | XP_002314711.1 | 9.41E-109 | hypothetical protein POPTR_0010s10090g [Populus trichocarpa] |
| Swissprot | tr|Q3E936|MAKR1_ARATH | 4.00E-74 | Probable membrane-associated kinase regulator 1 |
| trEMBL | tr|B9HV78|B9HV78_POPTR | 4.00E-109 | Uncharacterized protein {ECO:0000313|EMBL:EEF00882.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00094 | 86755 | 87819 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.579 |
| SRR1783600 | control | 0.584 |
| SRR1783602 | moderate drought stress | 0.468 |
| SRR1811619 | moderate drought stress | 0.402 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.196 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.464 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.122 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.319 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.867 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.876 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.046 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.345 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.900 |
| SRR2868004 | Drought Stress (root) | 9.723 |
| SRR2967015 | Control (root) | 14.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.520 |
| SRR9715740 | Leaf | 0.179 |
| SRR9715741 | Leaf | 1.436 |
| SRR9715739 | Root | 1.123 |
| SRR9715742 | Root | 1.376 |
| SRR9715743 | Root | 1.263 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 31.241 |
| SRR8749028 | MeJA induced 9h | 20.455 |
| SRR8749029 | MeJA induced 9h | 36.783 |
| SRR8749030 | Uninduced | 21.056 |
| SRR8749031 | Uninduced | 26.041 |
| SRR8749032 | Uninduced | 41.933 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.215 |
| SRR8400027 | Control - Root | 3.147 |