Gene detail information of Glyur000093s00009391 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G60800.2 | 6.00E-22 | Heavy metal transport/detoxification superfamily protein |
| NR | KHN38722.1 | 3.09E-70 | Copper-transporting ATPase 2 [Glycine soja] |
| Swissprot | tr|Q9SZN7|HIP26_ARATH | 4.00E-10 | Heavy metal-associated isoprenylated plant protein 26 (Precursor) |
| trEMBL | tr|I1LL17|I1LL17_SOYBN | 3.00E-70 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G20030.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00093 | 224751 | 226561 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000093s00009391.1 | PF00403.21 | HMA | 31 | 89 | 3.70E-13 |
| Glyur000093s00009391.2 | PF00403.21 | HMA | 26 | 84 | 3.50E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 28.731 |
| SRR1783600 | control | 28.720 |
| SRR1783602 | moderate drought stress | 23.833 |
| SRR1811619 | moderate drought stress | 24.461 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 177.846 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 170.083 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.680 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.463 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 420.039 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 410.365 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 138.272 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 135.558 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.397 |
| SRR2868004 | Drought Stress (root) | 21.404 |
| SRR2967015 | Control (root) | 72.176 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 283.465 |
| SRR9715740 | Leaf | 169.458 |
| SRR9715741 | Leaf | 200.669 |
| SRR9715739 | Root | 124.421 |
| SRR9715742 | Root | 623.221 |
| SRR9715743 | Root | 513.545 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 409.479 |
| SRR8749028 | MeJA induced 9h | 97.619 |
| SRR8749029 | MeJA induced 9h | 156.306 |
| SRR8749030 | Uninduced | 24.299 |
| SRR8749031 | Uninduced | 3.609 |
| SRR8749032 | Uninduced | 10.479 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 28.328 |
| SRR8400027 | Control - Root | 197.780 |